RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 DEFB1P60022 68 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 ARL16Q0P5N6 197 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 RAB32Q13637 225 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 DEFB135Q30KP9 77 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 C16orf54Q6UWD8 224 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 OR1B1Q8NGR6 318 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 SMIM8Q96KF7 97 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 C2orf50Q96LR7 162 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 RAB40CQ96S21 281 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 COL7A1Q02388 2944 aa6.69□□□□□ -1.34
GTF3C1-210ENST00000569394 NBEAL2Q6ZNJ1 2754 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 PMS2P5A8MQ11 134 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 IL5P05113 134 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 SNRPCP09234 159 aaKnown RBP6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 EIF2B2P49770 351 aaKnown RBP6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 ATP5IP56385 69 aaPredicted RBP6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 FGL1Q08830 312 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 SLC38A11Q08AI6 406 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 PSMG4Q5JS54 123 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 SIGLEC15Q6ZMC9 328 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 LINC00322Q6ZN03 302 aaPredicted RBP6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 THAP8Q8NA92 274 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 OR10P1Q8NGE3 313 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 RNF141Q8WVD5 230 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 LINC00052Q96N35 136 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 TRGV9Q99603 122 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 MGAT4CQ9UBM8 478 aa6.68□□□□□ -1.34
GTF3C1-210ENST00000569394 BUB3O43684 328 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 IGKV3-20P01619 116 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 FABP1P07148 127 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 OR5G3P0C626 314 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 PVALBP20472 110 aaPredicted RBP6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 SUMO1P63165 101 aaKnown RBP6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 IGFL4Q6B9Z1 124 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 TMEM14EPQ6UXP3 125 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 CYP2G1PQ6ZSU1 146 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 OR8I2Q8N0Y5 310 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 STPG3Q8N7X2 389 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 BPIFCQ8NFQ6 507 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 CHAC2Q8WUX2 184 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 GLMPQ8WWB7 406 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 U3KQE9 123 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 AGRNO00468 2067 aa6.67□□□□□ -1.34
GTF3C1-210ENST00000569394 IGSF23A1L1A6 192 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 HELTA6NFD8 242 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 K7EQG2 157 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 TSC22D2O75157 780 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 LINC00869P0C866 280 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 APOC4P55056 127 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 FXYD7P58549 80 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 STHQ8IWL8 128 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 DCANP1Q8TF63 244 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 UHRF2Q96PU4 802 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 TMEM147Q9BVK8 224 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 SCRT1Q9BWW7 348 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 ARL6Q9H0F7 186 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 CLEC5AQ9NY25 188 aa6.66□□□□□ -1.34
GTF3C1-210ENST00000569394 UBE2L5PA0A1B0GUS4 154 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 DEFB4AO15263 64 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 SPRY2O43597 315 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 CA1P00915 261 aaPredicted RBP6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 CD5P06127 495 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 DLK1P80370 383 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 BAXQ07812 192 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 TEPPQ6URK8 271 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 TMEM144Q7Z5S9 345 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 OVOL2Q9BRP0 275 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 MARVELD1Q9BSK0 173 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 RSG1Q9BU20 258 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 SLC25A32Q9H2D1 315 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 NPVFQ9HCQ7 196 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 NRN1Q9NPD7 142 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 OR5AC2Q9NZP5 309 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 ALG5Q9Y673 324 aa6.65□□□□□ -1.34
GTF3C1-210ENST00000569394 A0A0J9YWU9 116 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 ZNF98A6NK75 572 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 F6UB75 175 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 H3BTX0 84 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 AGPAT2O15120 278 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 PRAF2O60831 178 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 AP2S1P53680 142 aaPredicted RBP6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 CMC4P56277 68 aaPredicted RBP6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 H2BFSP57053 126 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 TAS2R30P59541 319 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 RAP2BP61225 183 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 NHLH2Q02577 135 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 PMS2P11Q13670 270 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 MIC13Q5XKP0 118 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 TMEM252Q8N6L7 170 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 MUC7Q8TAX7 377 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 C16orf92Q96LL3 132 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 MGST2Q99735 147 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 CSTL1Q9H114 145 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 HIGD1AQ9Y241 93 aa6.64□□□□□ -1.35
GTF3C1-210ENST00000569394 H0YIZ8 118 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 HYPMO75409 117 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 DEDDO75618 318 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 RLN2P04090 185 aa6.63□□□□□ -1.35
GTF3C1-210ENST00000569394 LYL1P12980 280 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms