RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 SCGB1C1Q8TD33 95 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 BSCL2Q96G97 398 aaPredicted RBP8.29□□□□□ -1.08
CDH3-208ENST00000569036 RITA1Q96K30 269 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 IMMP2LQ96T52 175 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 RARRES2Q99969 163 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 Q9N2K0 584 aa8.29□□□□□ -1.08
CDH3-208ENST00000569036 FAM24AA6NFZ4 105 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 A8MWP6 167 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 TRGC2P03986 189 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 METTL15P1P0C7V9 234 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 AADACP22760 399 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 GAMTQ14353 236 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 IQCJQ1A5X6 159 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 DEFB114Q30KQ6 69 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 OR1P1Q8NH06 330 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 DYNLRB2Q8TF09 96 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 TMEM18Q96B42 140 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 FAAP24Q9BTP7 215 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 CABLES2Q9BTV7 478 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 PARP12Q9H0J9 701 aaKnown RBP8.28□□□□□ -1.08
CDH3-208ENST00000569036 MANBALQ9NQG1 85 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 PEMTQ9UBM1 199 aa8.28□□□□□ -1.08
CDH3-208ENST00000569036 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 SLC33A1O00400 549 aaPredicted RBP8.27□□□□□ -1.09
CDH3-208ENST00000569036 NBR2O15453 112 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 SSSCA1O60232 199 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 TRBV12-3P01733 135 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 FABP4P15090 132 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 IL3RAP26951 378 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 FXYD4P59646 89 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 ATP6V1FQ16864 119 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 MRGPRG-AS1Q2M3A8 158 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 RPEL1Q2QD12 228 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 PHLDA2Q53GA4 152 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 TMEM41BQ5BJD5 291 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 UNQ5815/PRO19632Q6UWF5 114 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 Q6ZR54 194 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 MOB1BQ7L9L4 216 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 TBC1D26Q86UD7 250 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 OR5D18Q8NGL1 313 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 MRGPRDQ8TDS7 321 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 TMEM170AQ8WVE7 144 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 FRZBQ92765 325 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 TP53RKQ96S44 253 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 NEU1Q99519 415 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 TXNDC17Q9BRA2 123 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 MAGT1Q9H0U3 335 aa8.27□□□□□ -1.09
CDH3-208ENST00000569036 IGHV4-4A0A075B6R2 117 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 TRAV9-1A0A075B6T8 112 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 DEGS1O15121 323 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 KBTBD11O94819 623 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 NAPSAO96009 420 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 GNRHRP30968 328 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 RAB11AP62491 216 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 CX3CL1P78423 397 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 CCL20P78556 96 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 TMEM267Q0VDI3 215 aaPredicted RBP8.26□□□□□ -1.09
CDH3-208ENST00000569036 MSMO1Q15800 293 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 SP6Q3SY56 376 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 SLC25A24Q6NUK1 477 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 Q6P435 159 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 KCNIP4Q6PIL6 250 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 PPP1R27Q86WC6 154 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 LILRB2Q8N423 598 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 ABHD5Q8WTS1 349 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 HDHD3Q9BSH5 251 aaPredicted RBP8.26□□□□□ -1.09
CDH3-208ENST00000569036 FAM103A1Q9BTL3 118 aaKnown RBP8.26□□□□□ -1.09
CDH3-208ENST00000569036 C11orf68Q9H3H3 251 aaKnown RBP8.26□□□□□ -1.09
CDH3-208ENST00000569036 ZNF355PQ9NSJ1 428 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 ST3GAL6Q9Y274 331 aa8.26□□□□□ -1.09
CDH3-208ENST00000569036 ZNF727A8MUV8 499 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 C11orf94C9JXX5 98 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 HSPB6O14558 160 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 HRASP01112 189 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 PFN1P07737 140 aaKnown RBP8.25□□□□□ -1.09
CDH3-208ENST00000569036 EDN2P20800 178 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 ZNF137PP52743 207 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 NUTF2P61970 127 aaKnown RBP8.25□□□□□ -1.09
CDH3-208ENST00000569036 RANP62826 216 aaKnown RBP8.25□□□□□ -1.09
CDH3-208ENST00000569036 TNP2Q05952 138 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 TMEM241Q24JQ0 296 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 C8orf31Q8N9H6 132 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 PLPPR1Q8TBJ4 325 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 NCOR1P1Q9H4R4 102 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
CDH3-208ENST00000569036 GAB2Q9UQC2 676 aa8.25□□□□□ -1.09
CDH3-208ENST00000569036 IGLV2-18A0A075B6J9 118 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 TRAV39A0A0B4J263 110 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 A0A1B0GV90 55 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 H7BYZ3 331 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 NDUFA3O95167 84 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 AMBPP02760 352 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 P0DMU3 169 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 FAM231AP0DMU4 169 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 FAM231CP0DMU5 169 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 GZMBP10144 247 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 BTF3P20290 206 aaKnown RBP8.24□□□□□ -1.09
CDH3-208ENST00000569036 F2RP25116 425 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 PSMB3P49720 205 aa8.24□□□□□ -1.09
CDH3-208ENST00000569036 RELQ04864 619 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms