RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SCGB3A2Q96PL1 93 aa10.45□□□□□ -0.74
USB1-214ENST00000568848 PBDC1Q9BVG4 233 aa10.45□□□□□ -0.74
USB1-214ENST00000568848 SAV1Q9H4B6 383 aaPredicted RBP10.45□□□□□ -0.74
USB1-214ENST00000568848 HEYLQ9NQ87 328 aaPredicted RBP10.45□□□□□ -0.74
USB1-214ENST00000568848 CEBPZOSA8MTT3 80 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 ZNF705GA8MUZ8 300 aaPredicted RBP10.44□□□□□ -0.74
USB1-214ENST00000568848 PSG1P11464 419 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 KRTAP10-2P60368 255 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 DAD1P61803 113 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 LYZL2Q7Z4W2 148 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 SPATA12Q7Z6I5 190 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 Q8N1X5 172 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 OR52E5Q8NH55 327 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 C7orf50Q9BRJ6 194 aaKnown RBP10.44□□□□□ -0.74
USB1-214ENST00000568848 TMED3Q9Y3Q3 217 aa10.44□□□□□ -0.74
USB1-214ENST00000568848 NBDYA0A0U1RRE5 68 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 RPS10-NUDT3A0A1W2PQS6 291 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 SOCS3O14543 225 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 NUDT3O95989 172 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 FAUP35544 74 aaKnown RBP10.43□□□□□ -0.74
USB1-214ENST00000568848 NKX2-1P43699 371 aaPredicted RBP10.43□□□□□ -0.74
USB1-214ENST00000568848 YPEL3P61236 119 aaPredicted RBP10.43□□□□□ -0.74
USB1-214ENST00000568848 ZNF90Q03938 601 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 FAM78BQ5VT40 261 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 IGFL4Q6B9Z1 124 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 TMED4Q7Z7H5 227 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 C6orf223Q8N319 242 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 SLC24A4Q8NFF2 622 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 IL22RA2Q969J5 263 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 ATG101Q9BSB4 218 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
USB1-214ENST00000568848 DMBT1Q9UGM3 2413 aaPredicted RBP10.43□□□□□ -0.74
USB1-214ENST00000568848 TRAV30A0A087WSZ9 112 aa10.42□□□□□ -0.74
USB1-214ENST00000568848 TMEM189A5PLL7 270 aa10.42□□□□□ -0.74
USB1-214ENST00000568848 ZNF701M0R085 212 aaPredicted RBP10.42□□□□□ -0.74
USB1-214ENST00000568848 TOMM40O96008 361 aa10.42□□□□□ -0.74
USB1-214ENST00000568848 RD3LP0DJH9 198 aa10.42□□□□□ -0.74
USB1-214ENST00000568848 SULT1A3P0DMM9 295 aa10.42□□□□□ -0.74
USB1-214ENST00000568848 SULT1A4P0DMN0 295 aa10.42□□□□□ -0.74
USB1-214ENST00000568848 AP2S1P53680 142 aaPredicted RBP10.42□□□□□ -0.74
USB1-214ENST00000568848 AP3S2P59780 193 aa10.42□□□□□ -0.74
USB1-214ENST00000568848 SRRQ9GZT4 340 aa10.42□□□□□ -0.74
USB1-214ENST00000568848 A0A0B4J2A0 478 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 HBE1P02100 147 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 DEFB130BP0DP73 79 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 DEFB130AP0DP74 79 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 HTR2BP41595 481 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 DLK1P80370 383 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 OR2F1Q13607 317 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 C2orf83Q53S99 150 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 NMSQ5H8A3 153 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 FOXI2Q6ZQN5 318 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 LGI3Q8N145 548 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 COQ8AQ8NI60 647 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 RNF125Q96EQ8 232 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 FAM210BQ96KR6 192 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 C17orf77Q96MU5 243 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 SHPKQ9UHJ6 478 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 GOLT1BQ9Y3E0 138 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 LINC00588Q9Y4M8 146 aa10.41□□□□□ -0.74
USB1-214ENST00000568848 IGKV1D-37A0A075B6S9 117 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 M0R2Z0 102 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 AZU1P20160 251 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 CCR6P51684 374 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 LYZP61626 148 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 PSG9Q00887 426 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 SMCO1Q147U7 214 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 BAK1Q16611 211 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 RRN3P1Q2M238 152 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 TMEM128Q5BJH2 165 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 SPANXN2Q5MJ10 180 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 UHRF2Q96PU4 802 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 RBKSQ9H477 322 aa10.4□□□□□ -0.74
USB1-214ENST00000568848 MYCBP2O75592 4640 aa10.4□□□□□ -0.75
USB1-214ENST00000568848 LINC00854A0A1B0GVQ3 168 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 F5H768 121 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 SCGB2A1O75556 95 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 ANXA3P12429 323 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 VAMP1P23763 118 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 SPINK13Q1W4C9 94 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 BAP18Q8IXM2 172 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 OR1S1Q8NH92 325 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 MAGT1Q9H0U3 335 aa10.39□□□□□ -0.75
USB1-214ENST00000568848 A0A0J9YX75 114 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 SLC25A4P12235 298 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 PPP1R1AQ13522 171 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 OXA1LQ15070 435 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 AMTNQ6UX39 209 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 DTD1Q8TEA8 209 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 RNF141Q8WVD5 230 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 SDHCQ99643 169 aaPredicted RBP10.38□□□□□ -0.75
USB1-214ENST00000568848 SLC25A21Q9BQT8 299 aaPredicted RBP10.38□□□□□ -0.75
USB1-214ENST00000568848 TMEM208Q9BTX3 173 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 HSPB7Q9UBY9 170 aa10.38□□□□□ -0.75
USB1-214ENST00000568848 TRAV12-2A0A075B6T6 113 aa10.37□□□□□ -0.75
USB1-214ENST00000568848 PLAC8L1A1L4L8 177 aa10.37□□□□□ -0.75
USB1-214ENST00000568848 SFT2D2O95562 160 aa10.37□□□□□ -0.75
USB1-214ENST00000568848 PSMB3P49720 205 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms