RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-215	ENST00000568676	SNRPGP15	A8MWD9	76 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	GABARAP	H6UMI1	98 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	NOL3	O60936	208 aa	Known RBP	11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	CFD	P00746	253 aa	Predicted RBP	11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	MRPS10	P82664	201 aa	Known RBP	11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	CTF1	Q16619	201 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	RNASE12	Q5GAN4	147 aa	Known RBP	11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	C6orf223	Q8N319	242 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	RAB2B	Q8WUD1	216 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	IGF2BP2-AS1	Q96M15	143 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	BCL7B	Q9BQE9	202 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	TMEM208	Q9BTX3	173 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	EXTL2	Q9UBQ6	330 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	NACA	E9PAV3	2078 aa		11.12	□□□□□ -0.63
HERPUD1-215	ENST00000568676	PIGBOS1	A0A0B4J2F0	54 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	NBDY	A0A0U1RRE5	68 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	CRYM-AS1	A6NIL9	109 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676		A8MTW9	85 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	TMBIM6	P55061	237 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	DEFB1	P60022	68 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	TNP2	Q05952	138 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	CLVS1	Q8IUQ0	354 aa	Predicted RBP	11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	OR8I2	Q8N0Y5	310 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	LGI3	Q8N145	548 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	DTD1	Q8TEA8	209 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	SLC35E1	Q96K37	410 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	NAA50	Q9GZZ1	169 aa	Known RBP	11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	DOK5	Q9P104	306 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	HSPB7	Q9UBY9	170 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	KCNIP3	Q9Y2W7	256 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	HSPG2	P98160	4391 aa		11.11	□□□□□ -0.63
HERPUD1-215	ENST00000568676	DISC1	C4P0D8	188 aa		11.1	□□□□□ -0.63
HERPUD1-215	ENST00000568676	TSPO	P30536	169 aa		11.1	□□□□□ -0.63
HERPUD1-215	ENST00000568676	S100A7	P31151	101 aa		11.1	□□□□□ -0.63
HERPUD1-215	ENST00000568676	CCR6	P51684	374 aa		11.1	□□□□□ -0.63
HERPUD1-215	ENST00000568676	GAMT	Q14353	236 aa		11.1	□□□□□ -0.63
HERPUD1-215	ENST00000568676	PPP1R14B	Q96C90	147 aa		11.1	□□□□□ -0.63
HERPUD1-215	ENST00000568676	SLC45A2	Q9UMX9	530 aa		11.1	□□□□□ -0.63
HERPUD1-215	ENST00000568676	GPR132	Q9UNW8	380 aa		11.1	□□□□□ -0.63
HERPUD1-215	ENST00000568676	ZNF182	P17025	639 aa	Predicted RBP	11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	GALR1	P47211	349 aa		11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	CCL18	P55774	89 aa		11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	LYZ	P61626	148 aa		11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	ZNF90	Q03938	601 aa		11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	SMCO1	Q147U7	214 aa		11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	ZNRF2	Q8NHG8	242 aa		11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	C16orf92	Q96LL3	132 aa		11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	TRGV9	Q99603	122 aa		11.09	□□□□□ -0.63
HERPUD1-215	ENST00000568676	IGKV1D-37	A0A075B6S9	117 aa		11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676		F6UB75	175 aa		11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676	DUSP14	O95147	198 aa	Known RBP	11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676	INS	P01308	110 aa		11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676		Q8N1X5	172 aa		11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676	OR4D5	Q8NGN0	318 aa		11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676	GPR82	Q96P67	336 aa		11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676	SCGB3A2	Q96PL1	93 aa		11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676	PRRT1	Q99946	306 aa		11.08	□□□□□ -0.64
HERPUD1-215	ENST00000568676		A0A0B4J2A0	478 aa		11.07	□□□□□ -0.64
HERPUD1-215	ENST00000568676	SRPX	P78539	464 aa		11.07	□□□□□ -0.64
HERPUD1-215	ENST00000568676	GGNBP1	Q5YKI7	109 aa		11.07	□□□□□ -0.64
HERPUD1-215	ENST00000568676	AMTN	Q6UX39	209 aa		11.07	□□□□□ -0.64
HERPUD1-215	ENST00000568676	RBKS	Q9H477	322 aa		11.07	□□□□□ -0.64
HERPUD1-215	ENST00000568676	SHPK	Q9UHJ6	478 aa		11.07	□□□□□ -0.64
HERPUD1-215	ENST00000568676	ATP5G1	P05496	136 aa		11.06	□□□□□ -0.64
HERPUD1-215	ENST00000568676	AKAIN1	P0CW23	69 aa		11.06	□□□□□ -0.64
HERPUD1-215	ENST00000568676	AKR1C4	P17516	323 aa		11.06	□□□□□ -0.64
HERPUD1-215	ENST00000568676	ATP5G3	P48201	142 aa		11.06	□□□□□ -0.64
HERPUD1-215	ENST00000568676	RAB11A	P62491	216 aa		11.06	□□□□□ -0.64
HERPUD1-215	ENST00000568676	OR4C16	Q8NGL9	310 aa		11.06	□□□□□ -0.64
HERPUD1-215	ENST00000568676	CBY3	A6NI87	242 aa		11.05	□□□□□ -0.64
HERPUD1-215	ENST00000568676	ANXA3	P12429	323 aa		11.05	□□□□□ -0.64
HERPUD1-215	ENST00000568676	SPCS2	Q15005	226 aa		11.05	□□□□□ -0.64
HERPUD1-215	ENST00000568676	TTC32	Q5I0X7	151 aa		11.05	□□□□□ -0.64
HERPUD1-215	ENST00000568676	OR1B1	Q8NGR6	318 aa		11.05	□□□□□ -0.64
HERPUD1-215	ENST00000568676	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.05	□□□□□ -0.64
HERPUD1-215	ENST00000568676	RABL2B	Q9UNT1	228 aa		11.05	□□□□□ -0.64
HERPUD1-215	ENST00000568676	CCDC160	A6NGH7	325 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676		F5H768	121 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	NUDT3	O95989	172 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	DEFB130B	P0DP73	79 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	DEFB130A	P0DP74	79 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	CNN1	P51911	297 aa	Known RBP	11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	FAAP20	Q6NZ36	180 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	TMEM256	Q8N2U0	113 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	THAP8	Q8NA92	274 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	OR11H7	Q8NGC8	314 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	SMIM4	Q8WVI0	70 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	C20orf173	Q96LM9	149 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	RSG1	Q9BU20	258 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	CCDC59	Q9P031	241 aa	Known RBP	11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	SCP2D1	Q9UJQ7	156 aa		11.04	□□□□□ -0.64
HERPUD1-215	ENST00000568676	ZNF98	A6NK75	572 aa		11.03	□□□□□ -0.64
HERPUD1-215	ENST00000568676	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.03	□□□□□ -0.64
HERPUD1-215	ENST00000568676	RGS5	O15539	181 aa		11.03	□□□□□ -0.64
HERPUD1-215	ENST00000568676	CRX	O43186	299 aa	Predicted RBP	11.03	□□□□□ -0.64
HERPUD1-215	ENST00000568676	BTF3	P20290	206 aa	Known RBP	11.03	□□□□□ -0.64
HERPUD1-215	ENST00000568676	OR2F1	Q13607	317 aa		11.03	□□□□□ -0.64
HERPUD1-215	ENST00000568676	CLINT1	Q14677	625 aa		11.03	□□□□□ -0.64
HERPUD1-215	ENST00000568676	SPINK13	Q1W4C9	94 aa		11.03	□□□□□ -0.64

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