RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 CYTL1Q9NRR1 136 aa11.91□□□□□ -0.5
SPG7-218ENST00000568205 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
SPG7-218ENST00000568205 DOK5Q9P104 306 aa11.91□□□□□ -0.5
SPG7-218ENST00000568205 U3KQE9 123 aa11.91□□□□□ -0.5
SPG7-218ENST00000568205 BCL2L11O43521 198 aa11.9□□□□□ -0.5
SPG7-218ENST00000568205 HYPMO75409 117 aa11.9□□□□□ -0.5
SPG7-218ENST00000568205 APOHP02749 345 aaPredicted RBP11.9□□□□□ -0.5
SPG7-218ENST00000568205 BMI1P35226 326 aa11.9□□□□□ -0.5
SPG7-218ENST00000568205 LGALSLQ3ZCW2 172 aaPredicted RBP11.9□□□□□ -0.5
SPG7-218ENST00000568205 Q6ZRG5 221 aa11.9□□□□□ -0.5
SPG7-218ENST00000568205 HSD17B11Q8NBQ5 300 aa11.9□□□□□ -0.5
SPG7-218ENST00000568205 VSIRQ9H7M9 311 aa11.9□□□□□ -0.5
SPG7-218ENST00000568205 CMYA5Q8N3K9 4069 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 KANTRA0A1W2PQU2 76 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 CHEK1O14757 476 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 WIPF1O43516 503 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 COX7A2P2O60397 106 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 JTBO76095 146 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 IGLV1-51P01701 117 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 OR5G3P0C626 314 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 OXLD1Q5BKU9 147 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 C9orf62Q8N4C0 152 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 ST8SIA2Q92186 375 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 PPP1R14BQ96C90 147 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 TMEM231Q9H6L2 316 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 TECRQ9NZ01 308 aaKnown RBP11.89□□□□□ -0.51
SPG7-218ENST00000568205 MLXQ9UH92 298 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 PFDN2Q9UHV9 154 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 HIGD1AQ9Y241 93 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 TIMM9Q9Y5J7 89 aa11.89□□□□□ -0.51
SPG7-218ENST00000568205 IGHV3-66A0A0C4DH42 116 aa11.88□□□□□ -0.51
SPG7-218ENST00000568205 A0A1W2PS18 150 aa11.88□□□□□ -0.51
SPG7-218ENST00000568205 ATP6V0CP27449 155 aa11.88□□□□□ -0.51
SPG7-218ENST00000568205 DEFB114Q30KQ6 69 aa11.88□□□□□ -0.51
SPG7-218ENST00000568205 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
SPG7-218ENST00000568205 GRAMD2BQ96HH9 432 aa11.88□□□□□ -0.51
SPG7-218ENST00000568205 ARV1Q9H2C2 271 aa11.88□□□□□ -0.51
SPG7-218ENST00000568205 SELENOKQ9Y6D0 94 aa11.88□□□□□ -0.51
SPG7-218ENST00000568205 ELOA3CA0A087WX78 387 aaPredicted RBP11.87□□□□□ -0.51
SPG7-218ENST00000568205 BUB3O43684 328 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 S100A7P31151 101 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 CD300EQ496F6 205 aaPredicted RBP11.87□□□□□ -0.51
SPG7-218ENST00000568205 SAMD5Q5TGI4 173 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 LAMTOR1Q6IAA8 161 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 S100A7AQ86SG5 101 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 OR1L4Q8NGR5 311 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 TMEM37Q8WXS4 190 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 GNPNAT1Q96EK6 184 aaPredicted RBP11.87□□□□□ -0.51
SPG7-218ENST00000568205 PFDN5Q99471 154 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 RNF2Q99496 336 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 PSMG3Q9BT73 122 aaPredicted RBP11.87□□□□□ -0.51
SPG7-218ENST00000568205 SHANK2-AS3Q9BTD1 123 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 ZNF471Q9BX82 626 aaPredicted RBP11.87□□□□□ -0.51
SPG7-218ENST00000568205 DNAJC4Q9NNZ3 241 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 RFNGQ9Y644 331 aa11.87□□□□□ -0.51
SPG7-218ENST00000568205 G3V4G9 280 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 H3BRN7 92 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
SPG7-218ENST00000568205 GCSAMLQ5JQS6 135 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 FFAR4Q5NUL3 377 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 C10orf113Q5VZT2 155 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 C16orf54Q6UWD8 224 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 OR2K2Q8NGT1 345 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 UHRF2Q96PU4 802 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 SCRT1Q9BWW7 348 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 SLC25A39Q9BZJ4 359 aaPredicted RBP11.86□□□□□ -0.51
SPG7-218ENST00000568205 NOTCH1P46531 2555 aa11.86□□□□□ -0.51
SPG7-218ENST00000568205 ZNF98A6NK75 572 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 C1orf194Q5T5A4 169 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 TCF24Q7RTU0 167 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 TMEM61Q8N0U2 210 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 OR2G3Q8NGZ4 309 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 GATAD1Q8WUU5 269 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 GLMPQ8WWB7 406 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 SH3BGRL3Q9H299 93 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 NBEAL1Q6ZS30 2694 aa11.85□□□□□ -0.51
SPG7-218ENST00000568205 TRAV25A0A0B4J276 109 aa11.84□□□□□ -0.51
SPG7-218ENST00000568205 CD5P06127 495 aa11.84□□□□□ -0.51
SPG7-218ENST00000568205 EIF5AP63241 154 aaKnown RBP11.84□□□□□ -0.51
SPG7-218ENST00000568205 FAM90A2PQ658T7 463 aa11.84□□□□□ -0.51
SPG7-218ENST00000568205 LEMD1Q68G75 181 aa11.84□□□□□ -0.51
SPG7-218ENST00000568205 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
SPG7-218ENST00000568205 RBPMS2Q6ZRY4 209 aaKnown RBP11.84□□□□□ -0.51
SPG7-218ENST00000568205 SLC25A22Q9H936 323 aa11.84□□□□□ -0.51
SPG7-218ENST00000568205 IZUMO1RA6ND01 250 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 HELTA6NFD8 242 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 C4BPBP20851 252 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 SERF2P84101 59 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 ACOT6Q3I5F7 207 aaPredicted RBP11.83□□□□□ -0.52
SPG7-218ENST00000568205 OR8I2Q8N0Y5 310 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 STOML3Q8TAV4 291 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 SLC25A32Q9H2D1 315 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 RNF24Q9Y225 148 aa11.83□□□□□ -0.52
SPG7-218ENST00000568205 BOLA2-SMG1P6H3BVE0 249 aa11.82□□□□□ -0.52
SPG7-218ENST00000568205 TSPAN4O14817 238 aa11.82□□□□□ -0.52
SPG7-218ENST00000568205 TPT1P13693 172 aaKnown RBP11.82□□□□□ -0.52
SPG7-218ENST00000568205 M6PRP20645 277 aa11.82□□□□□ -0.52
SPG7-218ENST00000568205 RAB2AP61019 212 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms