RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 H3BMM0 161 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 ZNF688P0C7X2 276 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 HLA-DRB4P13762 266 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 BTCP35070 178 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 GALR1P47211 349 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 PAX9P55771 341 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 DLK1P80370 383 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 ZNF90Q03938 601 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 SPANXN5Q5MJ07 72 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 TMEM14EPQ6UXP3 125 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 FOXI2Q6ZQN5 318 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 OR8I2Q8N0Y5 310 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 CSNK1G2-AS1Q8NCQ2 148 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 OR10P1Q8NGE3 313 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 PSENENQ9NZ42 101 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 HLA-DRB4X5D2U9 266 aa8.16□□□□□ -1.1
CDH3-206ENST00000567674 TEX48A0A1B0GUV7 120 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 LYRM1O43325 122 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 TCRBP04435 133 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 GIG44P09565 113 aaPredicted RBP8.15□□□□□ -1.1
CDH3-206ENST00000567674 IAPPP10997 89 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 ZNF124Q15973 351 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 PSMG4Q5JS54 123 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 ACTL10Q5JWF8 245 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 Q8NAQ8 132 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 PHLDA1Q8WV24 401 aaPredicted RBP8.15□□□□□ -1.1
CDH3-206ENST00000567674 PBDC1Q9BVG4 233 aa8.15□□□□□ -1.1
CDH3-206ENST00000567674 SAV1Q9H4B6 383 aaPredicted RBP8.15□□□□□ -1.1
CDH3-206ENST00000567674 ZNF98A6NK75 572 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 PMS2P5A8MQ11 134 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 SOCS3O14543 225 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 PLA2G10O15496 165 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 ADAP1O75689 374 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 AMBPP02760 352 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 LYZP61626 148 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 B2MP61769 119 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 POLR2GP62487 172 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDH3-206ENST00000567674 IAH1Q2TAA2 248 aaPredicted RBP8.14□□□□□ -1.11
CDH3-206ENST00000567674 LGALS9CQ6DKI2 356 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 TEPPQ6URK8 271 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 PPP1R14BQ96C90 147 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 TMEM147Q9BVK8 224 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 C20orf85Q9H1P6 137 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 RPRMQ9NS64 109 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 CLEC5AQ9NY25 188 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 TBC1D24Q9ULP9 559 aa8.14□□□□□ -1.11
CDH3-206ENST00000567674 ELOA3CA0A087WX78 387 aaPredicted RBP8.13□□□□□ -1.11
CDH3-206ENST00000567674 A8MTW9 85 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 DEDDO75618 318 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 RPL7P18124 248 aaKnown RBP8.13□□□□□ -1.11
CDH3-206ENST00000567674 CXCL2P19875 107 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 RAP2BP61225 183 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 AKR1C1Q04828 323 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 ZNF846Q147U1 533 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 MZT2BQ6NZ67 158 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 EBLN2Q6P2I7 272 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 ACOT7LQ6ZUV0 252 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 ZBTB8BQ8NAP8 495 aaPredicted RBP8.13□□□□□ -1.11
CDH3-206ENST00000567674 ZNF431Q8TF32 576 aaPredicted RBP8.13□□□□□ -1.11
CDH3-206ENST00000567674 CHAC2Q8WUX2 184 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 LINC00476Q8WZB0 136 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 MAGT1Q9H0U3 335 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 MGAT4CQ9UBM8 478 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 PAIP2BQ9ULR5 123 aaKnown RBP8.13□□□□□ -1.11
CDH3-206ENST00000567674 FLVCR2Q9UPI3 526 aa8.13□□□□□ -1.11
CDH3-206ENST00000567674 HYPMO75409 117 aa8.12□□□□□ -1.11
CDH3-206ENST00000567674 IL5P05113 134 aa8.12□□□□□ -1.11
CDH3-206ENST00000567674 ANXA7P20073 488 aaKnown RBP8.12□□□□□ -1.11
CDH3-206ENST00000567674 PVALBP20472 110 aaPredicted RBP8.12□□□□□ -1.11
CDH3-206ENST00000567674 RAB31Q13636 194 aa8.12□□□□□ -1.11
CDH3-206ENST00000567674 ZNF705AQ6ZN79 300 aaPredicted RBP8.12□□□□□ -1.11
CDH3-206ENST00000567674 CYP2G1PQ6ZSU1 146 aa8.12□□□□□ -1.11
CDH3-206ENST00000567674 ZNF546Q86UE3 836 aa8.12□□□□□ -1.11
CDH3-206ENST00000567674 C2CD4CQ8TF44 421 aa8.12□□□□□ -1.11
CDH3-206ENST00000567674 A0A087X0K7 114 aa8.11□□□□□ -1.11
CDH3-206ENST00000567674 KNCNA6PVL3 124 aa8.11□□□□□ -1.11
CDH3-206ENST00000567674 ZNF705FA8MVS1 300 aaPredicted RBP8.11□□□□□ -1.11
CDH3-206ENST00000567674 DUSP14O95147 198 aaKnown RBP8.11□□□□□ -1.11
CDH3-206ENST00000567674 ZNF705DP0CH99 300 aaPredicted RBP8.11□□□□□ -1.11
CDH3-206ENST00000567674 ZNF705BP0CI00 300 aaPredicted RBP8.11□□□□□ -1.11
CDH3-206ENST00000567674 EWSR1Q01844 656 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDH3-206ENST00000567674 FAM210BQ96KR6 192 aa8.11□□□□□ -1.11
CDH3-206ENST00000567674 C2orf50Q96LR7 162 aa8.11□□□□□ -1.11
CDH3-206ENST00000567674 SHANK2-AS3Q9BTD1 123 aa8.11□□□□□ -1.11
CDH3-206ENST00000567674 HIGD1AQ9Y241 93 aa8.11□□□□□ -1.11
CDH3-206ENST00000567674 X6R8D5 127 aa8.11□□□□□ -1.11
CDH3-206ENST00000567674 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
CDH3-206ENST00000567674 A0A0J9YX75 114 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 FAM240BA0A1B0GVZ2 78 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 C7orf66A4D0T2 115 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 H3BRN7 92 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 SSSCA1O60232 199 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 MBPP02686 304 aaPredicted RBP8.1□□□□□ -1.11
CDH3-206ENST00000567674 ORM2P19652 201 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 C4BPBP20851 252 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 S100A11P31949 105 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 PSG9Q00887 426 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 ASAH1Q13510 395 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 OR2F1Q13607 317 aa8.1□□□□□ -1.11
CDH3-206ENST00000567674 OXA1LQ15070 435 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms