RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ANKRD29Q8N6D5 301 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 OR10K1Q8NGX5 313 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 OR2T10Q8NGZ9 312 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 MCFD2Q8NI22 146 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 PIGXQ8TBF5 258 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TMEM254Q8TBM7 123 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 RAB8BQ92930 207 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 POP5Q969H6 163 aaKnown RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ITFG2Q969R8 447 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 RAB37Q96AX2 223 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 PLEKHB2Q96CS7 222 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 C19orf60Q96EN9 201 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 LINC00208Q96KT6 92 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 PACRGQ96M98 296 aaPredicted RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 LYSMD1Q96S90 227 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 PRADC1Q9BSG0 188 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 CCDC94Q9BW85 323 aaPredicted RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 C6orf62Q9GZU0 229 aaPredicted RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TMEM126AQ9H061 195 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 LPAR5Q9H1C0 372 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 RNASE7Q9H1E1 156 aaKnown RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TAF9BQ9HBM6 251 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TMEM138Q9NPI0 162 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 C14orf132Q9NPU4 83 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 SLC39A9Q9NUM3 307 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 MED29Q9NX70 200 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 MRPL27Q9P0M9 148 aaKnown RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 TMEM56-RWDD3S4R434 201 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 U3KQA8 63 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 OBSL1O75147 1896 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 MYO5AQ9Y4I1 1855 aaKnown RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 DMBT1Q9UGM3 2413 aaPredicted RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 MYCBP2O75592 4640 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 NUP155O75694 1391 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ZFYVE26Q68DK2 2539 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 CCDC144AA2RUR9 1427 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ZFYVE9O95405 1425 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 ADGRL3Q9HAR2 1447 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 CDK12Q9NYV4 1490 aaPredicted RBP-0.23□□□□□ -2.45
CDH1-211ENST00000567320 MED12LQ86YW9 2145 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 RP1P56715 2156 aa-0.23□□□□□ -2.45
CDH1-211ENST00000567320 OTOGQ6ZRI0 2925 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 KIF1BO60333 1816 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 KIAA1549LQ6ZVL6 1849 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 STAB1Q9NY15 2570 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 BDP1A6H8Y1 2624 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 A0A087WSZ3 146 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 A0A087X0T9 212 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 A0A096LNT2 108 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.24□□□□□ -2.45
CDH1-211ENST00000567320 TRAV4A0A0B4J268 109 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 LOC101927531A0A1B0GV80 90 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 ODAMA1E959 279 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 TMEM256-PLSCR3K7ERE1 68 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 M0R233 179 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 PIRO00625 290 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 PFDN6O15212 129 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 YKT6O15498 198 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CYB5BO43169 146 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 TGOLN2O43493 480 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 NDUFB3O43676 98 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 NEMFO60524 1076 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CRYZL1O95825 349 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 S100A9P06702 114 aaKnown RBP-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CXCL1P09341 107 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 OR5G3P0C626 314 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CD79AP11912 226 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CYBAP13498 195 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 UCHL3P15374 230 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 PDE6GP18545 87 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 S100A4P26447 101 aaKnown RBP-0.24□□□□□ -2.45
CDH1-211ENST00000567320 INSL3P51460 131 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CAV3P56539 151 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 SPCS3P61009 180 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 ACOT6Q3I5F7 207 aaPredicted RBP-0.24□□□□□ -2.45
CDH1-211ENST00000567320 KRTAP19-8Q3LI54 63 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CLVS2Q5SYC1 327 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 SPOPLQ6IQ16 392 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CSAG1Q6PB30 78 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CASC2Q6XLA1 102 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 FOXI2Q6ZQN5 318 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 VMO1Q7Z5L0 202 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 OR5AS1Q8N127 324 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 C5orf56Q8N8D9 126 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 OR51A2Q8NGJ7 313 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 OR2T35Q8NGX2 323 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 PPTC7Q8NI37 304 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 SLC25A40Q8TBP6 338 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 TEX47Q8TBZ9 253 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CANT1Q8WVQ1 401 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 PTH2Q96A98 100 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 RMND5BQ96G75 393 aaPredicted RBP-0.24□□□□□ -2.45
CDH1-211ENST00000567320 C8orf76Q96K31 380 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 TP53RKQ96S44 253 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 GPER1Q99527 375 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 SLC25A21Q9BQT8 299 aaPredicted RBP-0.24□□□□□ -2.45
CDH1-211ENST00000567320 LLPHQ9BRT6 129 aaKnown RBP-0.24□□□□□ -2.45
CDH1-211ENST00000567320 DCUN1D5Q9BTE7 237 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 PBOV1Q9GZY1 135 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 PRTFDC1Q9NRG1 225 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms