RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 RAB11AP62491 216 aa10.31□□□□□ -0.76
COMMD4-216ENST00000567023 C1orf194Q5T5A4 169 aa10.31□□□□□ -0.76
COMMD4-216ENST00000567023 SLC35E1Q96K37 410 aa10.31□□□□□ -0.76
COMMD4-216ENST00000567023 C1QTNF4Q9BXJ3 329 aa10.31□□□□□ -0.76
COMMD4-216ENST00000567023 DNAH6Q9C0G6 4158 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 TRAV6A0A075B6T7 132 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 SNRPGP15A8MWD9 76 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 FABP1P07148 127 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 H2AFB2P0C5Z0 115 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 ID3Q02535 119 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 RPP25LQ8N5L8 163 aaKnown RBP10.3□□□□□ -0.76
COMMD4-216ENST00000567023 THAP8Q8NA92 274 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 TRGV9Q99603 122 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 CLEC5AQ9NY25 188 aa10.3□□□□□ -0.76
COMMD4-216ENST00000567023 IGKV1OR2-108A0A075B7D4 117 aa10.29□□□□□ -0.76
COMMD4-216ENST00000567023 ELOA3CA0A087WX78 387 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-216ENST00000567023 MED6O75586 246 aa10.29□□□□□ -0.76
COMMD4-216ENST00000567023 IFNA21P01568 189 aa10.29□□□□□ -0.76
COMMD4-216ENST00000567023 HLA-DRB4P13762 266 aa10.29□□□□□ -0.76
COMMD4-216ENST00000567023 OR4D5Q8NGN0 318 aa10.29□□□□□ -0.76
COMMD4-216ENST00000567023 ZNF431Q8TF32 576 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-216ENST00000567023 CLUHP3Q96NS8 147 aa10.29□□□□□ -0.76
COMMD4-216ENST00000567023 CIB3Q96Q77 187 aaPredicted RBP10.29□□□□□ -0.76
COMMD4-216ENST00000567023 PBDC1Q9BVG4 233 aa10.29□□□□□ -0.76
COMMD4-216ENST00000567023 HLA-DRB4X5D2U9 266 aa10.29□□□□□ -0.76
COMMD4-216ENST00000567023 PRSS46E5RG02 174 aa10.28□□□□□ -0.76
COMMD4-216ENST00000567023 SOCS3O14543 225 aa10.28□□□□□ -0.76
COMMD4-216ENST00000567023 SYNGR2O43760 224 aa10.28□□□□□ -0.76
COMMD4-216ENST00000567023 DEDDO75618 318 aa10.28□□□□□ -0.76
COMMD4-216ENST00000567023 CFDP00746 253 aaPredicted RBP10.28□□□□□ -0.76
COMMD4-216ENST00000567023 HLA-DMBP28068 263 aa10.28□□□□□ -0.76
COMMD4-216ENST00000567023 RPP30P78346 268 aaKnown RBP10.28□□□□□ -0.76
COMMD4-216ENST00000567023 SEC22CQ9BRL7 303 aa10.28□□□□□ -0.76
COMMD4-216ENST00000567023 MAGT1Q9H0U3 335 aa10.28□□□□□ -0.76
COMMD4-216ENST00000567023 APLNQ9ULZ1 77 aa10.28□□□□□ -0.76
COMMD4-216ENST00000567023 IGLL5B9A064 214 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 IL5P05113 134 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 IAPPP10997 89 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 PSMB3P49720 205 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 LYZP61626 148 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 ZNF705AQ6ZN79 300 aaPredicted RBP10.27□□□□□ -0.77
COMMD4-216ENST00000567023 Q6ZTC4 211 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 NRARPQ7Z6K4 114 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 ENKURQ8TC29 256 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 NEU1Q99519 415 aa10.27□□□□□ -0.77
COMMD4-216ENST00000567023 SAV1Q9H4B6 383 aaPredicted RBP10.27□□□□□ -0.77
COMMD4-216ENST00000567023 TRAV10A0A0B4J240 114 aa10.26□□□□□ -0.77
COMMD4-216ENST00000567023 ID1P41134 155 aa10.26□□□□□ -0.77
COMMD4-216ENST00000567023 IAH1Q2TAA2 248 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-216ENST00000567023 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
COMMD4-216ENST00000567023 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
COMMD4-216ENST00000567023 SPATA31B1PQ5VZV4 182 aa10.26□□□□□ -0.77
COMMD4-216ENST00000567023 FOXI2Q6ZQN5 318 aa10.26□□□□□ -0.77
COMMD4-216ENST00000567023 ZBTB8BQ8NAP8 495 aaPredicted RBP10.26□□□□□ -0.77
COMMD4-216ENST00000567023 XCL2Q9UBD3 114 aa10.26□□□□□ -0.77
COMMD4-216ENST00000567023 SLC45A2Q9UMX9 530 aa10.26□□□□□ -0.77
COMMD4-216ENST00000567023 ZNF705FA8MVS1 300 aaPredicted RBP10.25□□□□□ -0.77
COMMD4-216ENST00000567023 WRBO00258 174 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 ISLRO14498 428 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 ZNF705DP0CH99 300 aaPredicted RBP10.25□□□□□ -0.77
COMMD4-216ENST00000567023 ZNF705BP0CI00 300 aaPredicted RBP10.25□□□□□ -0.77
COMMD4-216ENST00000567023 POLR2GP62487 172 aaKnown RBP eCLIP10.25□□□□□ -0.77
COMMD4-216ENST00000567023 PRR20EP86478 221 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 PRR20CP86479 221 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 PRR20DP86480 221 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 PRR20BP86481 221 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 PRR20AP86496 221 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 OR2F1Q13607 317 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 OR8I2Q8N0Y5 310 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 C12orf45Q8N5I9 185 aaPredicted RBP10.25□□□□□ -0.77
COMMD4-216ENST00000567023 LINC00052Q96N35 136 aa10.25□□□□□ -0.77
COMMD4-216ENST00000567023 HECTD4Q9Y4D8 3996 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 PAX9P55771 341 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 DEFA1P59665 94 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 DEFA3P59666 94 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 C12orf74Q32Q52 190 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 SPANXN5Q5MJ07 72 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 ZNF709Q8N972 641 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 MARVELD1Q9BSK0 173 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 RNF126Q9BV68 326 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
COMMD4-216ENST00000567023 CELA1Q9UNI1 258 aa10.24□□□□□ -0.77
COMMD4-216ENST00000567023 IGHV4-4A0A075B6R2 117 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 ZNF98A6NK75 572 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 CCSO14618 274 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 SSSCA1O60232 199 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 MEOX2P50222 304 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 DEFB1P60022 68 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 PPP1R14BQ96C90 147 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 SMIM8Q96KF7 97 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 C17orf77Q96MU5 243 aa10.23□□□□□ -0.77
COMMD4-216ENST00000567023 RCL1Q9Y2P8 373 aaKnown RBP10.23□□□□□ -0.77
COMMD4-216ENST00000567023 STRAPQ9Y3F4 350 aaKnown RBP10.23□□□□□ -0.77
COMMD4-216ENST00000567023 TMEM189A5PLL7 270 aa10.22□□□□□ -0.77
COMMD4-216ENST00000567023 INMT-MINDY4F8WBC2 141 aa10.22□□□□□ -0.77
COMMD4-216ENST00000567023 H3BP45 60 aa10.22□□□□□ -0.77
COMMD4-216ENST00000567023 PRAF2O60831 178 aa10.22□□□□□ -0.77
COMMD4-216ENST00000567023 MBPP02686 304 aaPredicted RBP10.22□□□□□ -0.77
COMMD4-216ENST00000567023 TAS2R30P59541 319 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms