RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 SLC45A2Q9UMX9 530 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 RFNGQ9Y644 331 aa10.73□□□□□ -0.69
RNF40-209ENST00000566703 IGKV3-20P01619 116 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 MEOX2P50222 304 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 LYZP61626 148 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 RPP30P78346 268 aaKnown RBP10.72□□□□□ -0.69
RNF40-209ENST00000566703 PSG9Q00887 426 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 OXA1LQ15070 435 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 EBLN2Q6P2I7 272 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 THAP8Q8NA92 274 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 DEDD2Q8WXF8 326 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 SLIRPQ9GZT3 109 aaKnown RBP10.72□□□□□ -0.69
RNF40-209ENST00000566703 DKK2Q9UBU2 259 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 GOLT1BQ9Y3E0 138 aa10.72□□□□□ -0.69
RNF40-209ENST00000566703 S100A7P31151 101 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 AP3S2P59780 193 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 LGALS9BQ3B8N2 356 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 ZNF709Q8N972 641 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 OR4B1Q8NGF8 309 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 OR4D5Q8NGN0 318 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 PPP1R14BQ96C90 147 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 SLC25A21Q9BQT8 299 aaPredicted RBP10.71□□□□□ -0.69
RNF40-209ENST00000566703 RPRMQ9NS64 109 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 TMED3Q9Y3Q3 217 aa10.71□□□□□ -0.69
RNF40-209ENST00000566703 IGHV3OR16-12A0A075B7B8 117 aa10.7□□□□□ -0.7
RNF40-209ENST00000566703 A8MTW9 85 aa10.7□□□□□ -0.7
RNF40-209ENST00000566703 GALR1P47211 349 aa10.7□□□□□ -0.7
RNF40-209ENST00000566703 FXYD7P58549 80 aa10.7□□□□□ -0.7
RNF40-209ENST00000566703 DEFB1P60022 68 aa10.7□□□□□ -0.7
RNF40-209ENST00000566703 OR2F1Q13607 317 aa10.7□□□□□ -0.7
RNF40-209ENST00000566703 NIPSNAP3BQ9BS92 247 aa10.7□□□□□ -0.7
RNF40-209ENST00000566703 IGKV1OR2-108A0A075B7D4 117 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 A0A0J9YX75 114 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 A0A1B0GVY2 172 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 NOL3O60936 208 aaKnown RBP10.69□□□□□ -0.7
RNF40-209ENST00000566703 IFNA21P01568 189 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 HBE1P02100 147 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 EMP1P54849 157 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 FAM78BQ5VT40 261 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 TMED4Q7Z7H5 227 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 C1orf158Q8N1D5 194 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 MCFD2Q8NI22 146 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 GPR82Q96P67 336 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 SCRT1Q9BWW7 348 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 SLC35B3Q9H1N7 401 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 VPS13DQ5THJ4 4388 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 FRAS1Q86XX4 4008 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 DNAH10Q8IVF4 4471 aa10.69□□□□□ -0.7
RNF40-209ENST00000566703 ZNF98A6NK75 572 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 SYNGR2O43760 224 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 IAPPP10997 89 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 VAMP1P23763 118 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 RRN3P1Q2M238 152 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 FAM222AQ5U5X8 452 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 TOMM5Q8N4H5 51 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 OR1B1Q8NGR6 318 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 TRIM63Q969Q1 353 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 C16orf92Q96LL3 132 aa10.68□□□□□ -0.7
RNF40-209ENST00000566703 PAIP2BQ9ULR5 123 aaKnown RBP10.68□□□□□ -0.7
RNF40-209ENST00000566703 PRSS46E5RG02 174 aa10.67□□□□□ -0.7
RNF40-209ENST00000566703 H3BMQ9 156 aa10.67□□□□□ -0.7
RNF40-209ENST00000566703 SFT2D2O95562 160 aa10.67□□□□□ -0.7
RNF40-209ENST00000566703 RNF212Q495C1 297 aa10.67□□□□□ -0.7
RNF40-209ENST00000566703 BPIFCQ8NFQ6 507 aa10.67□□□□□ -0.7
RNF40-209ENST00000566703 IGF2BP2-AS1Q96M15 143 aa10.67□□□□□ -0.7
RNF40-209ENST00000566703 C7orf50Q9BRJ6 194 aaKnown RBP10.67□□□□□ -0.7
RNF40-209ENST00000566703 RSG1Q9BU20 258 aa10.67□□□□□ -0.7
RNF40-209ENST00000566703 DOK5Q9P104 306 aa10.67□□□□□ -0.7
RNF40-209ENST00000566703 LOC102723971A0A1B0GUV8 181 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 PRSS29PA6NIE9 313 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 F6UB75 175 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 WRBO00258 174 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 RTL8CO15255 209 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 DUSP14O95147 198 aaKnown RBP10.66□□□□□ -0.7
RNF40-209ENST00000566703 B2MP61769 119 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 PYDC2Q56P42 97 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 AMTNQ6UX39 209 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 MAGT1Q9H0U3 335 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 SLC25A32Q9H2D1 315 aa10.66□□□□□ -0.7
RNF40-209ENST00000566703 M0R2N4 97 aa10.65□□□□□ -0.7
RNF40-209ENST00000566703 UBE2MP61081 183 aaKnown RBP10.65□□□□□ -0.7
RNF40-209ENST00000566703 SPANXN5Q5MJ07 72 aa10.65□□□□□ -0.7
RNF40-209ENST00000566703 TMEM144Q7Z5S9 345 aa10.65□□□□□ -0.7
RNF40-209ENST00000566703 UBE2DNLQ8IWF7 75 aa10.65□□□□□ -0.7
RNF40-209ENST00000566703 C20orf173Q96LM9 149 aa10.65□□□□□ -0.7
RNF40-209ENST00000566703 C17orf77Q96MU5 243 aa10.65□□□□□ -0.7
RNF40-209ENST00000566703 TMEM147Q9BVK8 224 aa10.65□□□□□ -0.7
RNF40-209ENST00000566703 SLC25A22Q9H936 323 aa10.65□□□□□ -0.7
RNF40-209ENST00000566703 STRAPQ9Y3F4 350 aaKnown RBP10.65□□□□□ -0.7
RNF40-209ENST00000566703 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.7
RNF40-209ENST00000566703 HOXB5P09067 269 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 MED14OSP0DP75 135 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 ORM2P19652 201 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 ID3Q02535 119 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 PPP1R1AQ13522 171 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 Q6ZR54 194 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 PLA2G2EQ9NZK7 142 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 HERC2O95714 4834 aa10.64□□□□□ -0.71
RNF40-209ENST00000566703 DNAH6Q9C0G6 4158 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms