RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 TRAV9-1A0A075B6T8 112 aa9.35□□□□□ -0.91
CDH1-210ENST00000566612 CKS2P33552 79 aa9.35□□□□□ -0.91
CDH1-210ENST00000566612 ATP5J2P56134 94 aa9.35□□□□□ -0.91
CDH1-210ENST00000566612 GUSBP1Q15486 140 aa9.35□□□□□ -0.91
CDH1-210ENST00000566612 C3orf36Q3SXR2 165 aa9.35□□□□□ -0.91
CDH1-210ENST00000566612 GNB1LQ9BYB4 327 aa9.35□□□□□ -0.91
CDH1-210ENST00000566612 FNDC4Q9H6D8 234 aaPredicted RBP9.35□□□□□ -0.91
CDH1-210ENST00000566612 CLEC2AQ6UVW9 174 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 NCOR1P1Q9H4R4 102 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 F11RQ9Y624 299 aaKnown RBP9.34□□□□□ -0.91
CDH1-210ENST00000566612 NAV3Q8IVL0 2385 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 VWC2Q2TAL6 325 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 C16orf92Q96LL3 132 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
CDH1-210ENST00000566612 PTPN13Q12923 2485 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 SH2D7A6NKC9 451 aaPredicted RBP9.34□□□□□ -0.91
CDH1-210ENST00000566612 RPLP1P05386 114 aaKnown RBP9.34□□□□□ -0.91
CDH1-210ENST00000566612 PRR20EP86478 221 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 PRR20CP86479 221 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 PRR20DP86480 221 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 PRR20BP86481 221 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 PRR20AP86496 221 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 TPTE2P1Q5T6R2 138 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 CLEC19AQ6UXS0 136 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 ST6GALNAC6Q969X2 333 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 FMC1Q96HJ9 113 aa9.34□□□□□ -0.91
CDH1-210ENST00000566612 TFPI2P48307 235 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 PMCHL1Q16048 86 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 TMEM78Q5T7P6 136 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
CDH1-210ENST00000566612 ZNF664Q8N3J9 261 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 KLF2Q9Y5W3 355 aaPredicted RBP9.33□□□□□ -0.92
CDH1-210ENST00000566612 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 M0R3E3 92 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 SFTPCP11686 197 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 CX3CL1P78423 397 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 DDB2Q92466 427 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 METTL26Q96S19 204 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 HSPB8Q9UJY1 196 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
CDH1-210ENST00000566612 SPANXN1Q5VSR9 72 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 RBPMS2Q6ZRY4 209 aaKnown RBP9.33□□□□□ -0.92
CDH1-210ENST00000566612 KCNS1Q96KK3 526 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 PMCHL2Q9BQD1 86 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 NDUFAF3Q9BU61 184 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 F5H697 171 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 IGFL4Q6B9Z1 124 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 RITA1Q96K30 269 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 TRGV9Q99603 122 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 CHODLQ9H9P2 273 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 OTORQ9NRC9 128 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 DYSFO75923 2080 aa9.33□□□□□ -0.92
CDH1-210ENST00000566612 FNDC10F2Z333 226 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 M0QZK8 103 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 P0C879 139 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 BMI1P35226 326 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 TSKUQ8WUA8 353 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 SELENOKQ9Y6D0 94 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 COL4A2P08572 1712 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 TNRC6AQ8NDV7 1962 aaKnown RBP9.32□□□□□ -0.92
CDH1-210ENST00000566612 KIAA1549Q9HCM3 1950 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 COL5A1P20908 1838 aaPredicted RBP9.32□□□□□ -0.92
CDH1-210ENST00000566612 TRBV20OR9-2A0A075B6H5 130 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 A0A1B0GWJ7 208 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 NDUFS6O75380 124 aaKnown RBP9.32□□□□□ -0.92
CDH1-210ENST00000566612 ZNF324O75467 553 aaPredicted RBP9.32□□□□□ -0.92
CDH1-210ENST00000566612 TCRAP04437 139 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 HTN1P15515 57 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 RPL15P61313 204 aaKnown RBP9.32□□□□□ -0.92
CDH1-210ENST00000566612 POU2AF1Q16633 256 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 VMO1Q7Z5L0 202 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 UQCR10Q9UDW1 63 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 PSG8Q9UQ74 426 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 CBY3A6NI87 242 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 SHISA9B4DS77 424 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 E7EUB6 86 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 DLX6P56179 175 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 ZNF329Q86UD4 541 aa9.32□□□□□ -0.92
CDH1-210ENST00000566612 K7EN84 100 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 PSG9Q00887 426 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 RNF151Q2KHN1 245 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 MORN5Q5VZ52 161 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 ZNF738Q8NE65 137 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 AP5S1Q9NUS5 200 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 HCFC1P51610 2035 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 M0QZ24 198 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 IGHV3-11P01762 117 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 SMIM17P0DL12 118 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 C5orf64Q2M2E5 130 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 LCN12Q6JVE5 192 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 SLC25A2Q9BXI2 301 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 IGKV1OR2-108A0A075B7D4 117 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 IFITM10A6NMD0 228 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 PTTG1IPP53801 180 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 RHOGP84095 191 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 TANC2Q9HCD6 1990 aa9.31□□□□□ -0.92
CDH1-210ENST00000566612 TRGV3P03979 118 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms