RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 SAV1Q9H4B6 383 aaPredicted RBP13.18□□□□□ -0.3
USB1-213ENST00000566292 WRBO00258 174 aa13.17□□□□□ -0.3
USB1-213ENST00000566292 IGKV3-20P01619 116 aa13.17□□□□□ -0.3
USB1-213ENST00000566292 PSMB3P49720 205 aa13.17□□□□□ -0.3
USB1-213ENST00000566292 FXYD7P58549 80 aa13.17□□□□□ -0.3
USB1-213ENST00000566292 GGNBP1Q5YKI7 109 aa13.17□□□□□ -0.3
USB1-213ENST00000566292 ZNF705AQ6ZN79 300 aaPredicted RBP13.17□□□□□ -0.3
USB1-213ENST00000566292 ZNF767PQ75MW2 155 aa13.17□□□□□ -0.3
USB1-213ENST00000566292 CIB3Q96Q77 187 aaPredicted RBP13.17□□□□□ -0.3
USB1-213ENST00000566292 HECTD4Q9Y4D8 3996 aa13.16□□□□□ -0.3
USB1-213ENST00000566292 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
USB1-213ENST00000566292 ID1P41134 155 aa13.16□□□□□ -0.3
USB1-213ENST00000566292 FOXI2Q6ZQN5 318 aa13.16□□□□□ -0.3
USB1-213ENST00000566292 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
USB1-213ENST00000566292 PPP1R14BQ96C90 147 aa13.16□□□□□ -0.3
USB1-213ENST00000566292 SRRQ9GZT4 340 aa13.16□□□□□ -0.3
USB1-213ENST00000566292 ZNF705FA8MVS1 300 aaPredicted RBP13.15□□□□□ -0.3
USB1-213ENST00000566292 ZNF705DP0CH99 300 aaPredicted RBP13.15□□□□□ -0.3
USB1-213ENST00000566292 ZNF705BP0CI00 300 aaPredicted RBP13.15□□□□□ -0.3
USB1-213ENST00000566292 TMEM182Q6ZP80 229 aaPredicted RBP13.15□□□□□ -0.3
USB1-213ENST00000566292 ZNF709Q8N972 641 aa13.15□□□□□ -0.3
USB1-213ENST00000566292 COQ8AQ8NI60 647 aa13.15□□□□□ -0.3
USB1-213ENST00000566292 C17orf77Q96MU5 243 aa13.15□□□□□ -0.3
USB1-213ENST00000566292 NEU1Q99519 415 aa13.15□□□□□ -0.3
USB1-213ENST00000566292 F6UB75 175 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 H3BP45 60 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 ADAP1O75689 374 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 GATA2P23769 480 aaPredicted RBP13.14□□□□□ -0.31
USB1-213ENST00000566292 UBE2MP61081 183 aaKnown RBP13.14□□□□□ -0.31
USB1-213ENST00000566292 RPP30P78346 268 aaKnown RBP13.14□□□□□ -0.31
USB1-213ENST00000566292 SPANXN5Q5MJ07 72 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 CLUHP3Q96NS8 147 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 RNF126Q9BV68 326 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 SCRT1Q9BWW7 348 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 SLC25A32Q9H2D1 315 aa13.14□□□□□ -0.31
USB1-213ENST00000566292 DEFB131BA0A096LNP1 70 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 C9orf170A2RU37 121 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 ISLRO14498 428 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 CFDP00746 253 aaPredicted RBP13.13□□□□□ -0.31
USB1-213ENST00000566292 BAK1Q16611 211 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 SPANXN2Q5MJ10 180 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 ACOT7LQ6ZUV0 252 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 OR4B1Q8NGF8 309 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 SLC35B3Q9H1N7 401 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 FLVCR2Q9UPI3 526 aa13.13□□□□□ -0.31
USB1-213ENST00000566292 IGHV3OR16-12A0A075B7B8 117 aa13.12□□□□□ -0.31
USB1-213ENST00000566292 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
USB1-213ENST00000566292 AMBPP02760 352 aa13.12□□□□□ -0.31
USB1-213ENST00000566292 PAX9P55771 341 aa13.12□□□□□ -0.31
USB1-213ENST00000566292 ID3Q02535 119 aa13.12□□□□□ -0.31
USB1-213ENST00000566292 BPIFCQ8NFQ6 507 aa13.12□□□□□ -0.31
USB1-213ENST00000566292 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
USB1-213ENST00000566292 SLC45A2Q9UMX9 530 aa13.12□□□□□ -0.31
USB1-213ENST00000566292 STRAPQ9Y3F4 350 aaKnown RBP13.12□□□□□ -0.31
USB1-213ENST00000566292 A0A0J9YX75 114 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 ZNF701M0R085 212 aaPredicted RBP13.11□□□□□ -0.31
USB1-213ENST00000566292 NDUFB6O95139 128 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 ORM2P19652 201 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 GALR1P47211 349 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 POLR2GP62487 172 aaKnown RBP eCLIP13.11□□□□□ -0.31
USB1-213ENST00000566292 AKR1C1Q04828 323 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 FAM78BQ5VT40 261 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 SPATA31B1PQ5VZV4 182 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 C16orf92Q96LL3 132 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 RSG1Q9BU20 258 aa13.11□□□□□ -0.31
USB1-213ENST00000566292 NAP1L6A6NFF2 107 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 SMIM9A6NGZ8 99 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 PMS2P5A8MQ11 134 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 MEOX2P50222 304 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 EMP1P54849 157 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 PSG9Q00887 426 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 EBLN2Q6P2I7 272 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 TMEM144Q7Z5S9 345 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 C1orf158Q8N1D5 194 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 OR4D5Q8NGN0 318 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 SDHCQ99643 169 aaPredicted RBP13.1□□□□□ -0.31
USB1-213ENST00000566292 RPRMQ9NS64 109 aa13.1□□□□□ -0.31
USB1-213ENST00000566292 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
USB1-213ENST00000566292 A8MTW9 85 aa13.09□□□□□ -0.31
USB1-213ENST00000566292 SAMD13Q5VXD3 122 aa13.09□□□□□ -0.31
USB1-213ENST00000566292 TRIQKQ629K1 86 aa13.09□□□□□ -0.31
USB1-213ENST00000566292 OR1B1Q8NGR6 318 aa13.09□□□□□ -0.31
USB1-213ENST00000566292 TMEM147Q9BVK8 224 aa13.09□□□□□ -0.31
USB1-213ENST00000566292 PSENENQ9NZ42 101 aa13.09□□□□□ -0.31
USB1-213ENST00000566292 RFNGQ9Y644 331 aa13.09□□□□□ -0.31
USB1-213ENST00000566292 LINC00854A0A1B0GVQ3 168 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 CCNKO75909 580 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 OR4E1P0C645 316 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 BTCP35070 178 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 INPP1P49441 399 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 AMTNQ6UX39 209 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 CYP2G1PQ6ZSU1 146 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 DOK5Q9P104 306 aa13.08□□□□□ -0.32
USB1-213ENST00000566292 TRAV8-2A0A0B4J237 113 aa13.07□□□□□ -0.32
USB1-213ENST00000566292 SMCO3A2RU48 225 aa13.07□□□□□ -0.32
USB1-213ENST00000566292 H3BRN7 92 aa13.07□□□□□ -0.32
USB1-213ENST00000566292 SSSCA1O60232 199 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms