RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 TRGV9Q99603 122 aa12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 TMEM133Q9H2Q1 129 aa12.37□□□□□ -0.43
GTF3C1-205ENST00000564747 FAM181BA6NEQ2 426 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 M0R2Z0 102 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 CCL25O15444 150 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 KLF5Q13887 457 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 Q56UQ5 140 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 EBLN2Q6P2I7 272 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 RNASEKQ6P5S7 137 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 DYNLRB1Q9NP97 96 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 APC2O95996 2303 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 POLEQ07864 2286 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 A0A1B0GXF2 115 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 OR2J3O76001 311 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 GP9P14770 177 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 PVRIGQ6DKI7 326 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 TEX45Q8NA69 505 aa12.36□□□□□ -0.43
GTF3C1-205ENST00000564747 UNQ5815/PRO19632Q6UWF5 114 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 KAAG1Q9UBP8 84 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 CSMD1Q96PZ7 3565 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 TRAV9-2A0A087WT02 112 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 E7EQL1 145 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 Q6ZVH6 145 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 GTSF1Q8WW33 167 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 C22orf15Q8WYQ4 148 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 ABHD17AQ96GS6 310 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 Q9H3A6 140 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 RPP21Q9H633 154 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 ZNF835Q9Y2P0 537 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 LRBAP50851 2863 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 IGHV2-26A0A0B4J1V2 119 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 CRYGBP07316 175 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 ATP5L2Q7Z4Y8 100 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 KIR3DL3Q8N743 410 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 C5orf17Q8NAS9 161 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 ZNF738Q8NE65 137 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 URB1-AS1Q96HZ7 61 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 PRSS22Q9GZN4 317 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 SIGLEC9Q9Y336 463 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 COX11Q9Y6N1 276 aa12.35□□□□□ -0.43
GTF3C1-205ENST00000564747 MUC6Q6W4X9 2439 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 ZNF318Q5VUA4 2279 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 SHISA9B4DS77 424 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 TCRAP04437 139 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 CA7P43166 264 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 FOXA3P55318 350 aaPredicted RBP12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 C8orf46Q8TAG6 207 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 PGLYRP4Q96LB8 373 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 JKAMPQ9P055 326 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 INSIG2Q9Y5U4 225 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 LYNX1G3V0Z9 82 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 M0QZ24 198 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 TOMM40O96008 361 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 LTAP01374 205 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 LYNX1P0DP58 116 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 HBBP68871 147 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 SSX8Q7RTT4 187 aa12.34□□□□□ -0.43
GTF3C1-205ENST00000564747 TRAV8-1A0A0A6YYK1 113 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 IGHV1-69-2A0A0G2JMI3 117 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 SH2D7A6NKC9 451 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 VSTM5A8MXK1 200 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 P01737 135 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 UBE2V1Q13404 147 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 Q71RC1 249 aaPredicted RBP12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 OR8B3Q8NGG8 313 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 FMC1Q96HJ9 113 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 OR8B2Q96RD0 313 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 DCHS2Q6V1P9 2916 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 C19orf71A6NCJ1 209 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 C2orf70A6NJV1 201 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 A8MWL6 223 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 PSG1P11464 419 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 IGLL1P15814 213 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 RNASE8Q8TDE3 154 aaKnown RBP12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
GTF3C1-205ENST00000564747 IGHV1-3A0A0C4DH29 117 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 TOX4O94842 621 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 IGLV1-47P01700 117 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 LYZP61626 148 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 PPP1R27Q86WC6 154 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 FBXL15Q9H469 300 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 CLEC5AQ9NY25 188 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 F11RQ9Y624 299 aaKnown RBP12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 SPATA12Q7Z6I5 190 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 HIGD1AQ9Y241 93 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 RELNP78509 3460 aa12.32□□□□□ -0.44
GTF3C1-205ENST00000564747 EXOC3-AS1Q8N2X6 119 aa12.31□□□□□ -0.44
GTF3C1-205ENST00000564747 Q8NA96 180 aa12.31□□□□□ -0.44
GTF3C1-205ENST00000564747 DAZAP1Q96EP5 407 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-205ENST00000564747 RALYQ9UKM9 306 aaKnown RBP12.31□□□□□ -0.44
GTF3C1-205ENST00000564747 PRB4P10163 310 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-205ENST00000564747 PLP1P60201 277 aa12.31□□□□□ -0.44
GTF3C1-205ENST00000564747 CIARTQ8N365 385 aaPredicted RBP12.31□□□□□ -0.44
GTF3C1-205ENST00000564747 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
GTF3C1-205ENST00000564747 BUB1B-PAK6H3BSN5 160 aa12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 IGLC1P0CG04 106 aa12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 COX7A1P24310 79 aa12.3□□□□□ -0.44
GTF3C1-205ENST00000564747 ZNF492Q9P255 531 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms