RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 AMBPP02760 352 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 IAPPP10997 89 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 SLC25A6P12236 298 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 INPP1P49441 399 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 PRR20EP86478 221 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 PRR20CP86479 221 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 PRR20DP86480 221 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 PRR20BP86481 221 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 PRR20AP86496 221 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 C12orf74Q32Q52 190 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 LINC00336Q6ZUF6 198 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 S100A7AQ86SG5 101 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 UBE2DNLQ8IWF7 75 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 BPIFCQ8NFQ6 507 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 DEDD2Q8WXF8 326 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 TRGV9Q99603 122 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 TMEM208Q9BTX3 173 aa6.89□□□□□ -1.31
CLN6-203ENST00000563917 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
CLN6-203ENST00000563917 WRBO00258 174 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 SYNGR2O43760 224 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 FXYD7P58549 80 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 PSG9Q00887 426 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 AKR1C1Q04828 323 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 ZNF705AQ6ZN79 300 aaPredicted RBP6.88□□□□□ -1.31
CLN6-203ENST00000563917 ZNF767PQ75MW2 155 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 POM121L12Q8N7R1 296 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 OR1B1Q8NGR6 318 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 FAM210BQ96KR6 192 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 GPR82Q96P67 336 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 TMEM147Q9BVK8 224 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 SLIRPQ9GZT3 109 aaKnown RBP6.88□□□□□ -1.31
CLN6-203ENST00000563917 MAGT1Q9H0U3 335 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 SLC25A22Q9H936 323 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 SLC45A2Q9UMX9 530 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 CELA1Q9UNI1 258 aa6.88□□□□□ -1.31
CLN6-203ENST00000563917 H3BMQ9 156 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 HOXB5P09067 269 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 ORM2P19652 201 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 RAP2BP61225 183 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 RRN3P1Q2M238 152 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 SPANXN5Q5MJ07 72 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 GDF5OSQ5U4N7 250 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 FAM78BQ5VT40 261 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 LRTM2Q8N967 370 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 CLUHP3Q96NS8 147 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 NIPSNAP3BQ9BS92 247 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 WDR12Q9GZL7 423 aaKnown RBP6.87□□□□□ -1.31
CLN6-203ENST00000563917 DOK5Q9P104 306 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 RNF24Q9Y225 148 aa6.87□□□□□ -1.31
CLN6-203ENST00000563917 STRAPQ9Y3F4 350 aaKnown RBP6.87□□□□□ -1.31
CLN6-203ENST00000563917 IGKV1D-37A0A075B6S9 117 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 LOC102723971A0A1B0GUV8 181 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 SMCO3A2RU48 225 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 ZNF705FA8MVS1 300 aaPredicted RBP6.86□□□□□ -1.31
CLN6-203ENST00000563917 PITX3O75364 302 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 DUSP14O95147 198 aaKnown RBP6.86□□□□□ -1.31
CLN6-203ENST00000563917 SFT2D2O95562 160 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 ZNF705DP0CH99 300 aaPredicted RBP6.86□□□□□ -1.31
CLN6-203ENST00000563917 ZNF705BP0CI00 300 aaPredicted RBP6.86□□□□□ -1.31
CLN6-203ENST00000563917 HTN3P15516 51 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 PAX9P55771 341 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 UBE2MP61081 183 aaKnown RBP6.86□□□□□ -1.31
CLN6-203ENST00000563917 FGL1Q08830 312 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 SPANXN2Q5MJ10 180 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 THAP8Q8NA92 274 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 OR4D5Q8NGN0 318 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 LRRC20Q8TCA0 184 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 SOSTQ9BQB4 213 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 RSG1Q9BU20 258 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 SLC35B3Q9H1N7 401 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
CLN6-203ENST00000563917 A0A0J9YX75 114 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 ZNF98A6NK75 572 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 IL5P05113 134 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 B2MP61769 119 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 DAD1P61803 113 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 PPP1R1AQ13522 171 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 ZNF79Q15937 498 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 SOHLH1Q5JUK2 328 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 FAM222AQ5U5X8 452 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 TRIQKQ629K1 86 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 SLC25A32Q9H2D1 315 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 DKK2Q9UBU2 259 aa6.85□□□□□ -1.31
CLN6-203ENST00000563917 NAP1L6A6NFF2 107 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 CENPXA8MT69 81 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 F6UB75 175 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 H3BP45 60 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 SOCS3O14543 225 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 INSP01308 110 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 RPL7P18124 248 aaKnown RBP6.84□□□□□ -1.31
CLN6-203ENST00000563917 DEFB1P60022 68 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 SELENOTP62341 195 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 OXA1LQ15070 435 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 GSG1LQ6UXU4 331 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 ACOT7LQ6ZUV0 252 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 ZNF709Q8N972 641 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 TRIM63Q969Q1 353 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 IGF2BP2-AS1Q96M15 143 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 PSENENQ9NZ42 101 aa6.84□□□□□ -1.31
CLN6-203ENST00000563917 HIGD1AQ9Y241 93 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms