RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
NME3-205ENST00000563854 UBE2MP61081 183 aaKnown RBP12.8□□□□□ -0.36
NME3-205ENST00000563854 GDF5OSQ5U4N7 250 aa12.8□□□□□ -0.36
NME3-205ENST00000563854 THAP8Q8NA92 274 aa12.8□□□□□ -0.36
NME3-205ENST00000563854 CSNK1G2-AS1Q8NCQ2 148 aa12.8□□□□□ -0.36
NME3-205ENST00000563854 SLC25A22Q9H936 323 aa12.8□□□□□ -0.36
NME3-205ENST00000563854 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
NME3-205ENST00000563854 GATA2P23769 480 aaPredicted RBP12.79□□□□□ -0.36
NME3-205ENST00000563854 PSMB3P49720 205 aa12.79□□□□□ -0.36
NME3-205ENST00000563854 POLR2GP62487 172 aaKnown RBP eCLIP12.79□□□□□ -0.36
NME3-205ENST00000563854 C4orf46Q504U0 113 aa12.79□□□□□ -0.36
NME3-205ENST00000563854 C1orf194Q5T5A4 169 aa12.79□□□□□ -0.36
NME3-205ENST00000563854 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
NME3-205ENST00000563854 Q6ZTC4 211 aa12.79□□□□□ -0.36
NME3-205ENST00000563854 ACOT7LQ6ZUV0 252 aa12.79□□□□□ -0.36
NME3-205ENST00000563854 OR4B1Q8NGF8 309 aa12.79□□□□□ -0.36
NME3-205ENST00000563854 IGHV3OR16-12A0A075B7B8 117 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 PRSS46E5RG02 174 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 SSSCA1O60232 199 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 SCGB1D2O95969 90 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 IFNA21P01568 189 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 ORM2P19652 201 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 ANXA7P20073 488 aaKnown RBP12.78□□□□□ -0.36
NME3-205ENST00000563854 ZNF767PQ75MW2 155 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 BPIFCQ8NFQ6 507 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 HRH4Q9H3N8 390 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 PSENENQ9NZ42 101 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 CELA1Q9UNI1 258 aa12.78□□□□□ -0.36
NME3-205ENST00000563854 CENPXA8MT69 81 aa12.77□□□□□ -0.37
NME3-205ENST00000563854 C11orf94C9JXX5 98 aa12.77□□□□□ -0.37
NME3-205ENST00000563854 OR4E1P0C645 316 aa12.77□□□□□ -0.37
NME3-205ENST00000563854 FOXI2Q6ZQN5 318 aa12.77□□□□□ -0.37
NME3-205ENST00000563854 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
NME3-205ENST00000563854 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.37
NME3-205ENST00000563854 SAV1Q9H4B6 383 aaPredicted RBP12.77□□□□□ -0.37
NME3-205ENST00000563854 DOK5Q9P104 306 aa12.77□□□□□ -0.37
NME3-205ENST00000563854 TRAV10A0A0B4J240 114 aa12.76□□□□□ -0.37
NME3-205ENST00000563854 F6UB75 175 aa12.76□□□□□ -0.37
NME3-205ENST00000563854 SOCS3O14543 225 aa12.76□□□□□ -0.37
NME3-205ENST00000563854 CFDP00746 253 aaPredicted RBP12.76□□□□□ -0.37
NME3-205ENST00000563854 GALR1P47211 349 aa12.76□□□□□ -0.37
NME3-205ENST00000563854 TMEM182Q6ZP80 229 aaPredicted RBP12.76□□□□□ -0.37
NME3-205ENST00000563854 C16orf92Q96LL3 132 aa12.76□□□□□ -0.37
NME3-205ENST00000563854 SDHCQ99643 169 aaPredicted RBP12.76□□□□□ -0.37
NME3-205ENST00000563854 TMEM147Q9BVK8 224 aa12.76□□□□□ -0.37
NME3-205ENST00000563854 ISLRO14498 428 aa12.75□□□□□ -0.37
NME3-205ENST00000563854 IL7P13232 177 aa12.75□□□□□ -0.37
NME3-205ENST00000563854 BTCP35070 178 aa12.75□□□□□ -0.37
NME3-205ENST00000563854 EMP1P54849 157 aa12.75□□□□□ -0.37
NME3-205ENST00000563854 RRAS2P62070 204 aaPredicted RBP12.75□□□□□ -0.37
NME3-205ENST00000563854 ID3Q02535 119 aa12.75□□□□□ -0.37
NME3-205ENST00000563854 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
NME3-205ENST00000563854 OR4D5Q8NGN0 318 aa12.75□□□□□ -0.37
NME3-205ENST00000563854 RSG1Q9BU20 258 aa12.75□□□□□ -0.37
NME3-205ENST00000563854 ZNF98A6NK75 572 aa12.74□□□□□ -0.37
NME3-205ENST00000563854 CCNKO75909 580 aa12.74□□□□□ -0.37
NME3-205ENST00000563854 SCRT1Q9BWW7 348 aa12.74□□□□□ -0.37
NME3-205ENST00000563854 SLC35B3Q9H1N7 401 aa12.74□□□□□ -0.37
NME3-205ENST00000563854 GSKIPQ9P0R6 139 aa12.74□□□□□ -0.37
NME3-205ENST00000563854 APLNQ9ULZ1 77 aa12.74□□□□□ -0.37
NME3-205ENST00000563854 IL5P05113 134 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 METTL15P1P0C7V9 234 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 MEOX2P50222 304 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 TCTAP57738 103 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 FGL1Q08830 312 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 IAH1Q2TAA2 248 aaPredicted RBP12.73□□□□□ -0.37
NME3-205ENST00000563854 FAM78BQ5VT40 261 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 CYP2G1PQ6ZSU1 146 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 TMEM144Q7Z5S9 345 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 C20orf173Q96LM9 149 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 C7orf50Q9BRJ6 194 aaKnown RBP12.73□□□□□ -0.37
NME3-205ENST00000563854 RPRMQ9NS64 109 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 SLC45A2Q9UMX9 530 aa12.73□□□□□ -0.37
NME3-205ENST00000563854 IGHV4-4A0A075B6R2 117 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 S100A7P31151 101 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 RAP2BP61225 183 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 PRR20EP86478 221 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 PRR20CP86479 221 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 PRR20DP86480 221 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 PRR20BP86481 221 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 PRR20AP86496 221 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 PSG9Q00887 426 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 C12orf74Q32Q52 190 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 SAMD13Q5VXD3 122 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 ZNF709Q8N972 641 aa12.72□□□□□ -0.37
NME3-205ENST00000563854 DEFB131BA0A096LNP1 70 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 A0A0J9YX75 114 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 OR5G3P0C626 314 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 LINC00869P0C866 280 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 SPATA31B1PQ5VZV4 182 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 IGFL4Q6B9Z1 124 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 ZNF705AQ6ZN79 300 aaPredicted RBP12.71□□□□□ -0.37
NME3-205ENST00000563854 ZBTB8BQ8NAP8 495 aaPredicted RBP12.71□□□□□ -0.37
NME3-205ENST00000563854 SMIM8Q96KF7 97 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 C20orf85Q9H1P6 137 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 MGAT4CQ9UBM8 478 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 HIGD1AQ9Y241 93 aa12.71□□□□□ -0.37
NME3-205ENST00000563854 ZNF705FA8MVS1 300 aaPredicted RBP12.7□□□□□ -0.38
NME3-205ENST00000563854 H3BRN7 92 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms