RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 FREM1Q5H8C1 2179 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 C15orf65H3BRN8 121 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 CENPVQ7Z7K6 275 aaPredicted RBP6.16□□□□□ -1.42
TCF4-216ENST00000562680 GPR82Q96P67 336 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 MAP1LC3CQ9BXW4 147 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 WNT10AQ9GZT5 417 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 IGHV3-21A0A0B4J1V1 117 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 DTX2Q86UW9 622 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 CLDND2Q8NHS1 167 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 ZNF581Q9P0T4 197 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 IGHV3OR16-10A0A075B7F0 116 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 SH2D7A6NKC9 451 aaPredicted RBP6.16□□□□□ -1.42
TCF4-216ENST00000562680 SIVA1O15304 175 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 GCHFRP30047 84 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 SRSF3P84103 164 aaKnown RBP6.16□□□□□ -1.42
TCF4-216ENST00000562680 RELBQ01201 579 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 ZNF833PQ6ZTB9 187 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 FAM110AQ9BQ89 295 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 TMEM126AQ9H061 195 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 MAP1LC3AQ9H492 121 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 OR2J3O76001 311 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 P01737 135 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 REG1AP05451 166 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 PMVKQ15126 192 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 C10orf91Q5T1B1 145 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 ST20Q9HBF5 79 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 C1QL1O75973 258 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 C17orf58Q2M2W7 97 aa6.16□□□□□ -1.42
TCF4-216ENST00000562680 SPINK4O60575 86 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 IL4P05112 153 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 OR5AN1Q8NGI8 311 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 MALRD1Q5VYJ5 2156 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 OR4C46A6NHA9 309 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 LINC00473A8K010 186 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 COL8A1P27658 744 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 FCGR2BP31994 310 aaPredicted RBP6.15□□□□□ -1.42
TCF4-216ENST00000562680 CDPF1Q6NVV7 123 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 CYB561D1Q8N8Q1 229 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 V9GYY9 64 aa6.15□□□□□ -1.42
TCF4-216ENST00000562680 EML5Q05BV3 1969 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 PSMB11A5LHX3 300 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 CD5LO43866 347 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 ADCYAP1P18509 176 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 EAF1Q96JC9 268 aaPredicted RBP6.15□□□□□ -1.43
TCF4-216ENST00000562680 SIGLEC9Q9Y336 463 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 TCRBV4S1A1TA0A5B7 111 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 VENTXO95231 258 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 FSTL3O95633 263 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 ARL14EPLP0DKL9 152 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 RIGQ13278 110 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 SH3BGRL3Q9H299 93 aa6.15□□□□□ -1.43
TCF4-216ENST00000562680 WNK2Q9Y3S1 2297 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 IGFBP2P18065 325 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 ZNF585BQ52M93 769 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 OR10J6PQ8NGY7 276 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 FGF23Q9GZV9 251 aaPredicted RBP6.14□□□□□ -1.43
TCF4-216ENST00000562680 EBLN2Q6P2I7 272 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 PGPA6NDG6 321 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 A8MWL6 223 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 TNFRSF6BO95407 300 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 APOMO95445 188 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 PTH2Q96A98 100 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 C16orf92Q96LL3 132 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 H3BVH4 76 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 MYOD1P15172 320 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 SPSB3Q6PJ21 355 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 GOLGB1Q14789 3259 aaKnown RBP6.14□□□□□ -1.43
TCF4-216ENST00000562680 GCSHP23434 173 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 HIST1H1AQ02539 215 aaPredicted RBP6.14□□□□□ -1.43
TCF4-216ENST00000562680 SHISA2Q6UWI4 295 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 RBPMS2Q6ZRY4 209 aaKnown RBP6.14□□□□□ -1.43
TCF4-216ENST00000562680 PRSS3P2Q8NHM4 247 aa6.14□□□□□ -1.43
TCF4-216ENST00000562680 IGHV1-69DA0A0B4J2H0 117 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 G3V4G9 280 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 IGHV1-69P01742 117 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 IGF2RP11717 2491 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 TSPOP30536 169 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 LINC00305Q7Z4B0 112 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 TRAV1-1A0A0B4J248 108 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 TRAV41A0A0B4J266 112 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 KIR2DL5BA0A0G2JN68 375 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 KIR2DL5BA0A0G2JPC4 375 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 WIPF3A6NGB9 483 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 VDAC2P45880 294 aaPredicted RBP6.13□□□□□ -1.43
TCF4-216ENST00000562680 KIR2DL5AQ8N109 375 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 F11RQ9Y624 299 aaKnown RBP6.13□□□□□ -1.43
TCF4-216ENST00000562680 FCN3O75636 299 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 TFF3Q07654 80 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 TRGV9Q99603 122 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 TRAV9-2A0A087WT02 112 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.13□□□□□ -1.43
TCF4-216ENST00000562680 LY6HO94772 140 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 GRNP28799 593 aaKnown RBP6.13□□□□□ -1.43
TCF4-216ENST00000562680 GPR183P32249 361 aa6.13□□□□□ -1.43
TCF4-216ENST00000562680 PCNX3Q9H6A9 2034 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.12□□□□□ -1.43
TCF4-216ENST00000562680 J3KT08 172 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 NDUFB4O95168 129 aa6.12□□□□□ -1.43
TCF4-216ENST00000562680 SAA4P35542 130 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms