RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 LRRC37A5PQ49AS3 106 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 PHLDA2Q53GA4 152 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 GGNBP1Q5YKI7 109 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 PVRIGQ6DKI7 326 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 TBC1D26Q86UD7 250 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 GRAMD2BQ96HH9 432 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 AQP10Q96PS8 301 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 ARPC5LQ9BPX5 153 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 PUS1Q9Y606 427 aaKnown RBP eCLIP8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 TMEM56-RWDD3S4R434 201 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 VPS13DQ5THJ4 4388 aa8.58□□□□□ -1.04
CARMIL3-204ENST00000561354 IGHV4-4A0A075B6R2 117 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 IGHV3-66A0A0C4DH42 116 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 A0A1B0GU03 582 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 LINC00862A6NCI5 91 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 RNF222A6NCQ9 220 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 K7EQG2 157 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 NPPCP23582 126 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 UCP1P25874 307 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 SLC7A5P1Q8MH63 180 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 STOML3Q8TAV4 291 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 GLYATL2Q8WU03 294 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 RNF126Q9BV68 326 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 RABAC1Q9UI14 185 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 X6R8D5 127 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 PCLOQ9Y6V0 5065 aa8.57□□□□□ -1.04
CARMIL3-204ENST00000561354 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 CORTO00230 105 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 TAAR5O14804 337 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 SLC25A6P12236 298 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 SNCAP37840 140 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 Q6ZTC4 211 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 CSNK1G2-AS1Q8NCQ2 148 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 LRRC20Q8TCA0 184 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 MED9Q9NWA0 146 aa8.56□□□□□ -1.04
CARMIL3-204ENST00000561354 ELOA3CA0A087WX78 387 aaPredicted RBP8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 E5RGE8 158 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 TPT1P13693 172 aaKnown RBP8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 CRYBB3P26998 211 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 SUB1P53999 127 aaKnown RBP eCLIP8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 S100A10P60903 97 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 RAB32Q13637 225 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 STXBP6Q8NFX7 210 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 DCANP1Q8TF63 244 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 RBPMSQ93062 196 aaKnown RBP8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 METTL26Q96S19 204 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 TP53RKQ96S44 253 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 SLC25A32Q9H2D1 315 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 GSKIPQ9P0R6 139 aa8.55□□□□□ -1.04
CARMIL3-204ENST00000561354 AGRNO00468 2067 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 RPS10-NUDT3A0A1W2PQS6 291 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 CLN5O75503 358 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 ATG12O94817 140 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 CFDP00746 253 aaPredicted RBP8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 AMBPP02760 352 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 P0C879 139 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 MED14OSP0DP75 135 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 PVALBP20472 110 aaPredicted RBP8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 P2RY1P47900 373 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 SP6Q3SY56 376 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 SPINK9Q5DT21 86 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 TMEM268Q5VZI3 342 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 EIF5AL1Q6IS14 154 aaKnown RBP8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 SLC35G3Q8N808 338 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 ZNF471Q9BX82 626 aaPredicted RBP8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 PRR13Q9NZ81 148 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 HECTD4Q9Y4D8 3996 aa8.54□□□□□ -1.04
CARMIL3-204ENST00000561354 DEFB131BA0A096LNP1 70 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 KNCNA6PVL3 124 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 H0YIZ8 118 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 K7EPK0 472 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 SCGB2A1O75556 95 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 IGKV1-5P01602 117 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 ZNF688P0C7X2 276 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 P0DMU3 169 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 FAM231AP0DMU4 169 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 FAM231CP0DMU5 169 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 RNASE2P10153 161 aaKnown RBP8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 IZUMO4Q1ZYL8 232 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 C12orf74Q32Q52 190 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 ACTL10Q5JWF8 245 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 LYZL2Q7Z4W2 148 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 SELENOHQ8IZQ5 122 aaKnown RBP8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 POM121L12Q8N7R1 296 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 OR4D5Q8NGN0 318 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 OR4X1Q8NH49 305 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 OR1S1Q8NH92 325 aa8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 NARS2Q96I59 477 aaKnown RBP8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 FNDC4Q9H6D8 234 aaPredicted RBP8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 MRPL36Q9P0J6 103 aaKnown RBP8.53□□□□□ -1.04
CARMIL3-204ENST00000561354 TRAV30A0A087WSZ9 112 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 IFNA17P01571 189 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 RPL12P30050 165 aaKnown RBP8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 OPRK1P41145 380 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 MLANAQ16655 118 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 NMSQ5H8A3 153 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 ALKAL2Q6UX46 152 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 FAM219AQ8IW50 185 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 LHFPL5Q8TAF8 219 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 RAB40CQ96S21 281 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms