RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 HEATR1Q9H583 2144 aaKnown RBP0.16□□□□□ -2.38
USP8-218ENST00000561330 PIK3C2GO75747 1445 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 TRGV10A0A0A0MS01 117 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 TRAV10A0A0B4J240 114 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 F8W1H4 67 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 H3BRM9 83 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 PDE6DO43924 150 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 SPINK7P58062 85 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 KRR1Q13601 381 aaKnown RBP0.15□□□□□ -2.39
USP8-218ENST00000561330 TEN1Q86WV5 123 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 EXOC3-AS1Q8N2X6 119 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 PARD6GQ9BYG4 376 aaPredicted RBP0.15□□□□□ -2.39
USP8-218ENST00000561330 GLTPQ9NZD2 209 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 FAT4Q6V0I7 4981 aa0.15□□□□□ -2.39
USP8-218ENST00000561330 A8MWV9 139 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 HIST1H3AP68431 136 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 H3F3AP84243 136 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 EDDM3AQ14507 147 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 PDZD9Q8IXQ8 264 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 OR51A2Q8NGJ7 313 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 OR5D14Q8NGL3 314 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 CANT1Q8WVQ1 401 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 MED29Q9NX70 200 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 PRELID3BQ9Y3B1 194 aa0.14□□□□□ -2.39
USP8-218ENST00000561330 ARHGEF28Q8N1W1 1705 aaKnown RBP0.13□□□□□ -2.39
USP8-218ENST00000561330 ALPK3Q96L96 1907 aa0.13□□□□□ -2.39
USP8-218ENST00000561330 K7EIL1 84 aa0.13□□□□□ -2.39
USP8-218ENST00000561330 RPP14O95059 124 aaKnown RBP0.13□□□□□ -2.39
USP8-218ENST00000561330 ROMO1P60602 79 aa0.13□□□□□ -2.39
USP8-218ENST00000561330 OR10K1Q8NGX5 313 aa0.13□□□□□ -2.39
USP8-218ENST00000561330 YPEL2Q96QA6 119 aa0.13□□□□□ -2.39
USP8-218ENST00000561330 UCK1Q9HA47 277 aa0.13□□□□□ -2.39
USP8-218ENST00000561330 TMEM138Q9NPI0 162 aa0.13□□□□□ -2.39
USP8-218ENST00000561330 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.13□□□□□ -2.39
USP8-218ENST00000561330 LY96Q9Y6Y9 160 aa0.13□□□□□ -2.39
USP8-218ENST00000561330 SYNE1Q8NF91 8797 aaKnown RBP0.12□□□□□ -2.39
USP8-218ENST00000561330 MYH10P35580 1976 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 KIAA1549Q9HCM3 1950 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 E7EUB6 86 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 NDUFB3O43676 98 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 LYPLA2O95372 231 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 RPS17P08708 135 aaKnown RBP0.12□□□□□ -2.39
USP8-218ENST00000561330 CEBPGP53567 150 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 DSCR4P56555 118 aaPredicted RBP0.12□□□□□ -2.39
USP8-218ENST00000561330 PTRHD1Q6GMV3 140 aaKnown RBP0.12□□□□□ -2.39
USP8-218ENST00000561330 C22orf39Q6P5X5 142 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 OR10AC1Q8NH08 325 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 STAG3L4Q8TBR4 150 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 ZNF431Q8TF32 576 aaPredicted RBP0.12□□□□□ -2.39
USP8-218ENST00000561330 LYSMD1Q96S90 227 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 SLC25A21Q9BQT8 299 aaPredicted RBP0.12□□□□□ -2.39
USP8-218ENST00000561330 TMEM126AQ9H061 195 aa0.12□□□□□ -2.39
USP8-218ENST00000561330 ZNF106Q9H2Y7 1883 aaKnown RBP0.12□□□□□ -2.39
USP8-218ENST00000561330 MYO18AQ92614 2054 aaKnown RBP0.11□□□□□ -2.39
USP8-218ENST00000561330 SMIM9A6NGZ8 99 aa0.11□□□□□ -2.39
USP8-218ENST00000561330 ERC2-IT1O76042 136 aa0.11□□□□□ -2.39
USP8-218ENST00000561330 AESQ08117 197 aa0.11□□□□□ -2.39
USP8-218ENST00000561330 TSKUQ8WUA8 353 aa0.11□□□□□ -2.39
USP8-218ENST00000561330 PHRF1Q9P1Y6 1649 aaKnown RBP0.11□□□□□ -2.39
USP8-218ENST00000561330 SSPOA2VEC9 5147 aa0.1□□□□□ -2.39
USP8-218ENST00000561330 CECR2Q9BXF3 1484 aa0.1□□□□□ -2.39
USP8-218ENST00000561330 TNCP24821 2201 aa0.1□□□□□ -2.39
USP8-218ENST00000561330 SPTBP11277 2137 aa0.1□□□□□ -2.39
USP8-218ENST00000561330 COX7CP15954 63 aa0.1□□□□□ -2.39
USP8-218ENST00000561330 PIGPP57054 158 aa0.1□□□□□ -2.39
USP8-218ENST00000561330 RANP62826 216 aaKnown RBP0.1□□□□□ -2.39
USP8-218ENST00000561330 RRN3P1Q2M238 152 aa0.1□□□□□ -2.39
USP8-218ENST00000561330 ADCY9O60503 1353 aa0.09□□□□□ -2.39
USP8-218ENST00000561330 ARHGEF11O15085 1522 aa0.09□□□□□ -2.39
USP8-218ENST00000561330 KDELR1P24390 212 aa0.09□□□□□ -2.4
USP8-218ENST00000561330 FOXA3P55318 350 aaPredicted RBP0.09□□□□□ -2.4
USP8-218ENST00000561330 TMEM97Q5BJF2 176 aa0.09□□□□□ -2.4
USP8-218ENST00000561330 Q6ZS92 163 aa0.09□□□□□ -2.4
USP8-218ENST00000561330 TET1Q8NFU7 2136 aa0.09□□□□□ -2.4
USP8-218ENST00000561330 FMN1Q68DA7 1419 aa0.09□□□□□ -2.4
USP8-218ENST00000561330 CITO14578 2027 aa0.09□□□□□ -2.4
USP8-218ENST00000561330 CXCL8P10145 99 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 ZNF137PP52743 207 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 MYL5Q02045 173 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 BCL2L15Q5TBC7 163 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 ATOH7Q8N100 152 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 Q8TAT8 98 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 PBOV1Q9GZY1 135 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 WFDC10AQ9H1F0 79 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 PLXND1Q9Y4D7 1925 aa0.08□□□□□ -2.4
USP8-218ENST00000561330 MYH7BA7E2Y1 1941 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 TRAV4A0A0B4J268 109 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 NIPSNAP2O75323 286 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 HAND1O96004 215 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 TCRBP04435 133 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 ERP29P30040 261 aaKnown RBP0.07□□□□□ -2.4
USP8-218ENST00000561330 LSM6P62312 80 aaKnown RBP0.07□□□□□ -2.4
USP8-218ENST00000561330 CDK6Q00534 326 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 C6orf52Q5T4I8 152 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 GNPDA2Q8TDQ7 276 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 FANCMQ8IYD8 2048 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 UNC13CQ8NB66 2214 aa0.07□□□□□ -2.4
USP8-218ENST00000561330 SCN8AQ9UQD0 1980 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 MUC4Q99102 2169 aa0.06□□□□□ -2.4
USP8-218ENST00000561330 ZDBF2Q9HCK1 2354 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms