RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 RABAC1Q9UI14 185 aa7.98□□□□□ -1.13
USP3-219ENST00000561326 PUS1Q9Y606 427 aaKnown RBP eCLIP7.98□□□□□ -1.13
USP3-219ENST00000561326 OR7C2O60412 319 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 IGHV3-11P01762 117 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 RPLP1P05386 114 aaKnown RBP7.97□□□□□ -1.13
USP3-219ENST00000561326 ARL14EPLP0DKL9 152 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 S100A1P23297 94 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 NPPCP23582 126 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 GCHFRP30047 84 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 ADMP35318 185 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 CDX1P47902 265 aaPredicted RBP7.97□□□□□ -1.13
USP3-219ENST00000561326 FAM106AQ4KMX7 169 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 TOMM20LQ6UXN7 152 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 SSX7Q7RTT5 188 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 WFDC12Q8WWY7 111 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 NARS2Q96I59 477 aaKnown RBP7.97□□□□□ -1.13
USP3-219ENST00000561326 UHRF2Q96PU4 802 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 TREM1Q9NP99 234 aa7.97□□□□□ -1.13
USP3-219ENST00000561326 NIPBLQ6KC79 2804 aaeCLIP7.96□□□□□ -1.13
USP3-219ENST00000561326 FN1P02751 2386 aaKnown RBP7.96□□□□□ -1.13
USP3-219ENST00000561326 PPP5D1E7EU14 171 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 NDUFA4O00483 81 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 ATP6V1G1O75348 118 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 KIAA0141Q14154 515 aaPredicted RBP7.96□□□□□ -1.14
USP3-219ENST00000561326 HAGHQ16775 308 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 SPATA31B1PQ5VZV4 182 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 C10orf99Q6UWK7 81 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 LCNL1Q6ZST4 164 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 LINC01006Q8NI28 216 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 SUN5Q8TC36 379 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 MYOZ3Q8TDC0 251 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 METTL26Q96S19 204 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 TXNDC17Q9BRA2 123 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 PAXXQ9BUH6 204 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 SLC25A39Q9BZJ4 359 aaPredicted RBP7.96□□□□□ -1.14
USP3-219ENST00000561326 OR51M1Q9H341 326 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 VAX2Q9UIW0 290 aa7.96□□□□□ -1.14
USP3-219ENST00000561326 IGHV3-35A0A0C4DH35 117 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 A0A1B0GUS0 222 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 CLPSL1A2RUU4 121 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 HSPB1P04792 205 aaKnown RBP7.95□□□□□ -1.14
USP3-219ENST00000561326 CD5P06127 495 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 LGALS1P09382 135 aaKnown RBP7.95□□□□□ -1.14
USP3-219ENST00000561326 TOR2AQ5JU69 321 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 ZNF506Q5JVG8 444 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 BPIFA4PQ86YQ2 179 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 GPHB5Q86YW7 130 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 OR5B12Q96R08 314 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 SHANK2-AS3Q9BTD1 123 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 C20orf24Q9BUV8 137 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 NKX6-2Q9C056 277 aaPredicted RBP7.95□□□□□ -1.14
USP3-219ENST00000561326 TMPRSS5Q9H3S3 457 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 RNF114Q9Y508 228 aa7.95□□□□□ -1.14
USP3-219ENST00000561326 TRAV5A0A0B4J249 113 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 ZNF320A2RRD8 509 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 ZNF98A6NK75 572 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 KRBOX1C9JBD0 128 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 H3BRN7 92 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 I3L521 148 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 EIF3GO75821 320 aaKnown RBP eCLIP7.94□□□□□ -1.14
USP3-219ENST00000561326 BCL2P10415 239 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 ZP3P21754 424 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 UBE2L3P68036 154 aaKnown RBP7.94□□□□□ -1.14
USP3-219ENST00000561326 USF2Q15853 346 aaPredicted RBP7.94□□□□□ -1.14
USP3-219ENST00000561326 RPEL1Q2QD12 228 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 KHDC1LQ5JSQ8 128 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 C1orf194Q5T5A4 169 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 CST9LP1Q5W188 147 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 OR8I2Q8N0Y5 310 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 OR4F17Q8NGA8 305 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 DPF1Q92782 380 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 GRAMD2BQ96HH9 432 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 FAM167A-AS1Q96KT0 104 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 GPR82Q96P67 336 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 OR4F4Q96R69 305 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 RARRES2Q99969 163 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 SLC25A2Q9BXI2 301 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 ZFAND3Q9H8U3 227 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 TMEM14CQ9P0S9 112 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 ARL2-SNX15V9GYD0 113 aa7.94□□□□□ -1.14
USP3-219ENST00000561326 SETD2Q9BYW2 2564 aaPredicted RBP7.93□□□□□ -1.14
USP3-219ENST00000561326 LOC102723971A0A1B0GUV8 181 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 A0A1W2PS18 150 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 K7EMT4 169 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 HAX1O00165 279 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 PAGE4O60829 102 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 NDUFS6O75380 124 aaKnown RBP7.93□□□□□ -1.14
USP3-219ENST00000561326 TRBV12-3P01733 135 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 RPL7P18124 248 aaKnown RBP7.93□□□□□ -1.14
USP3-219ENST00000561326 BMI1P35226 326 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 MEF2BQ02080 365 aaPredicted RBP7.93□□□□□ -1.14
USP3-219ENST00000561326 MORN5Q5VZ52 161 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 RXFP4Q8TDU9 374 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 C4orf3Q8WVX3 66 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 SCRT1Q9BWW7 348 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 SLC35B3Q9H1N7 401 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 UFC1Q9Y3C8 167 aa7.93□□□□□ -1.14
USP3-219ENST00000561326 A0A1W2PRE2 83 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 TMEM218A2RU14 115 aa7.92□□□□□ -1.14
USP3-219ENST00000561326 C11orf94C9JXX5 98 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms