RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	FAM90A26	D6RGX4	464 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	PRSS46	E5RG02	174 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	SCGB2A1	O75556	95 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	SFT2D2	O95562	160 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	LY6G6C	O95867	125 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	RBMY1A1	P0DJD3	496 aa	Known RBP	5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	RBMY1C	P0DJD4	496 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	RD3L	P0DJH9	198 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	ANXA3	P12429	323 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	BTC	P35070	178 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	FAU	P35544	74 aa	Known RBP	5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	SRPX	P78539	464 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	RBMY1F	Q15415	496 aa	Known RBP	5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	BAK1	Q16611	211 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	TMEM128	Q5BJH2	165 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	PSMG4	Q5JS54	123 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	ACTL10	Q5JWF8	245 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	ETFRF1	Q6IPR1	90 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	SIGLEC15	Q6ZMC9	328 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	LRTM2	Q8N967	370 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	RNF125	Q96EQ8	232 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	MAGT1	Q9H0U3	335 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	FLVCR2	Q9UPI3	526 aa		5.37	□□□□□ -1.55
ZEB1-223	ENST00000561304	PKHD1	P08F94	4074 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	DUXB	A0A1W2PPF3	345 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	HELT	A6NFD8	242 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	IFNA4	P05014	189 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	HOXB5	P09067	269 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	S100A5	P33763	92 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	AP3S2	P59780	193 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	OR2F1	Q13607	317 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	GDF5OS	Q5U4N7	250 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	GGNBP1	Q5YKI7	109 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	RPP25L	Q8N5L8	163 aa	Known RBP	5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	CSNK1G2-AS1	Q8NCQ2	148 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	NARS2	Q96I59	477 aa	Known RBP	5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	RAB40C	Q96S21	281 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	PBDC1	Q9BVG4	233 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	WDR12	Q9GZL7	423 aa	Known RBP	5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	FBXL17	Q9UF56	701 aa		5.36	□□□□□ -1.55
ZEB1-223	ENST00000561304	IGHV4-28	A0A0C4DH34	117 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	C9orf118	A6NHY6	69 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	ZFP92	A6NM28	416 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	ZNF705E	A8MWA4	302 aa	Predicted RBP	5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304		H3BP45	60 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	SOCS3	O14543	225 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	DEDD	O75618	318 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	ADAP1	O75689	374 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	SPP1	P10451	314 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	SLC25A6	P12236	298 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	GPX4	P36969	197 aa	Predicted RBP	5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	EIF2B2	P49770	351 aa	Known RBP	5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	LYZ	P61626	148 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	TMEM182	Q6ZP80	229 aa	Predicted RBP	5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	NOXA1	Q86UR1	476 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	CENPS	Q8N2Z9	138 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	TMEM217	Q8N7C4	229 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	C11orf45	Q8TAV5	145 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	SLC35E1	Q96K37	410 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	C17orf77	Q96MU5	243 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	NRN1	Q9NPD7	142 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	CACFD1	Q9UGQ2	172 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	PAIP2B	Q9ULR5	123 aa	Known RBP	5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	CELA1	Q9UNI1	258 aa		5.35	□□□□□ -1.55
ZEB1-223	ENST00000561304	LINC00854	A0A1B0GVQ3	168 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	C9orf170	A2RU37	121 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304		H3BMM0	161 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	ZNF701	M0R085	212 aa	Predicted RBP	5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	WRB	O00258	174 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	SYNGR2	O43760	224 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	CCNK	O75909	580 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	NDUFB6	O95139	128 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	GATA2	P23769	480 aa	Predicted RBP	5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	FXYD7	P58549	80 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	OR8G2P	Q6IF36	304 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	MORN3	Q6PF18	240 aa	Predicted RBP	5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	THAP8	Q8NA92	274 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	DEDD2	Q8WXF8	326 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	TRGV9	Q99603	122 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	TMED3	Q9Y3Q3	217 aa		5.34	□□□□□ -1.55
ZEB1-223	ENST00000561304	PKD1	P98161	4303 aa		5.34	□□□□□ -1.56
ZEB1-223	ENST00000561304	PMS2P5	A8MQ11	134 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304		F6UB75	175 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	IGKV3-20	P01619	116 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	HLA-DRB4	P13762	266 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	ANXA7	P20073	488 aa	Known RBP	5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	AP2S1	P53680	142 aa	Predicted RBP	5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	ATP5I	P56385	69 aa	Predicted RBP	5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	UBE2M	P61081	183 aa	Known RBP	5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	SNRPD3	P62318	126 aa	Known RBP	5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	POLR2G	P62487	172 aa	Known RBP eCLIP	5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	RAB11A	P62491	216 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	SPANXN5	Q5MJ07	72 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	SPANXN2	Q5MJ10	180 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304		Q6ZTC4	211 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	ACOT7L	Q6ZUV0	252 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	ZNF767P	Q75MW2	155 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	ZNF709	Q8N972	641 aa		5.33	□□□□□ -1.56
ZEB1-223	ENST00000561304	OR4D5	Q8NGN0	318 aa		5.33	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms