RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 ZNF674Q2M3X9 581 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 DEFB136Q30KP8 78 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 COX19Q49B96 90 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 RPL39P5Q59GN2 51 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 KCNIP4Q6PIL6 250 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 LCNL1Q6ZST4 164 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 HAPLN4Q86UW8 402 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 PDPNQ86YL7 162 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 ZNF491Q8N8L2 437 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 TMEM170AQ8WVE7 144 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 RAB24Q969Q5 203 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 C5orf30Q96GV9 206 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 ADTRPQ96IZ2 230 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 PFDN5Q99471 154 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 B9D2Q9BPU9 175 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 SMIM7Q9BQ49 75 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 C20orf24Q9BUV8 137 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 NPCDR1Q9BY65 106 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 GNG13Q9P2W3 67 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 WDR83OSQ9Y284 106 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 WASHC3Q9Y3C0 194 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 RBM7Q9Y580 266 aaKnown RBP5.33□□□□□ -1.56
SPG11-224ENST00000561268 STAB2Q8WWQ8 2551 aa5.33□□□□□ -1.56
SPG11-224ENST00000561268 TRAV41A0A0B4J266 112 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 IFITM10A6NMD0 228 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 C9JCJ5 164 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 INS-IGF2F8WCM5 200 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 G3V318 75 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 TSTD3H0UI37 97 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 RAMP3O60896 148 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 MT-CO2P00403 227 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 IGLV2-23P01705 113 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 IGKV1-16P04430 117 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 CXCL1P09341 107 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 AREGP15514 252 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 FGF7P21781 194 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 HOXD3P31249 432 aaPredicted RBP5.32□□□□□ -1.56
SPG11-224ENST00000561268 MC5RP33032 325 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 RAB4BP61018 213 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 ARL16Q0P5N6 197 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 JOSD1Q15040 202 aaPredicted RBP5.32□□□□□ -1.56
SPG11-224ENST00000561268 MRGPRG-AS1Q2M3A8 158 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 PYY3Q5JQD4 70 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 C9orf66Q5T8R8 295 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 SLC16A13Q7RTY0 426 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 H2BFWTQ7Z2G1 175 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 ZNF383Q8NA42 475 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 DTD1Q8TEA8 209 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 IL1F10Q8WWZ1 152 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 DDB2Q92466 427 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 DPF1Q92782 380 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 RSG1Q9BU20 258 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 KLK15Q9H2R5 256 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 RBKSQ9H477 322 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 GNB4Q9HAV0 340 aa5.32□□□□□ -1.56
SPG11-224ENST00000561268 LSM4Q9Y4Z0 139 aaKnown RBP5.32□□□□□ -1.56
SPG11-224ENST00000561268 TRBV9A0A0B4J1U6 114 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 ZFP92A6NM28 416 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 MARCH11A6NNE9 402 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 CEBPZOSA8MTT3 80 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 LINC00587B1AMM8 73 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 H7BYZ3 331 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 TRGC2P03986 189 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 CRYGBP07316 175 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 LGALS1P09382 135 aaKnown RBP5.31□□□□□ -1.56
SPG11-224ENST00000561268 TRGC1P0CF51 173 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 ESDP10768 282 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 AKR1C3P42330 323 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 CDC34P49427 236 aaPredicted RBP5.31□□□□□ -1.56
SPG11-224ENST00000561268 INSL3P51460 131 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 RPL23P62829 140 aaKnown RBP5.31□□□□□ -1.56
SPG11-224ENST00000561268 GNB1P62873 340 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 CX3CL1P78423 397 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 TMEM267Q0VDI3 215 aaPredicted RBP5.31□□□□□ -1.56
SPG11-224ENST00000561268 AKIRIN2Q53H80 203 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 ACTL10Q5JWF8 245 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 SPANXN5Q5MJ07 72 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 C16orf54Q6UWD8 224 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 ZNF562Q6V9R5 426 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 TMEM144Q7Z5S9 345 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 OR10G9Q8NGN4 311 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 OR10G7Q8NGN6 311 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 ABHD5Q8WTS1 349 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 C11orf52Q96A22 123 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 RPUSD4Q96CM3 377 aaKnown RBP5.31□□□□□ -1.56
SPG11-224ENST00000561268 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 OR2D2Q9H210 308 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 FBXL15Q9H469 300 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 FOXA2Q9Y261 457 aaPredicted RBP5.31□□□□□ -1.56
SPG11-224ENST00000561268 ZNF257Q9Y2Q1 563 aa5.31□□□□□ -1.56
SPG11-224ENST00000561268 HUWE1Q7Z6Z7 4374 aaKnown RBP5.3□□□□□ -1.56
SPG11-224ENST00000561268 TENM3Q9P273 2699 aa5.3□□□□□ -1.56
SPG11-224ENST00000561268 TGIF2-C20orf24A0A0A6YYL0 155 aa5.3□□□□□ -1.56
SPG11-224ENST00000561268 PRSS46E5RG02 174 aa5.3□□□□□ -1.56
SPG11-224ENST00000561268 H3BUA1 57 aa5.3□□□□□ -1.56
SPG11-224ENST00000561268 TNFSF12O43508 249 aa5.3□□□□□ -1.56
SPG11-224ENST00000561268 CXorf1O96002 111 aa5.3□□□□□ -1.56
SPG11-224ENST00000561268 OR10J4P0C629 311 aa5.3□□□□□ -1.56
SPG11-224ENST00000561268 STAG3L2P0CL84 134 aa5.3□□□□□ -1.56
SPG11-224ENST00000561268 STAG3L3P0CL85 134 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms