RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 RNF2Q99496 336 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 ZMAT4Q9H898 229 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 DNAJC4Q9NNZ3 241 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 MRPL36Q9P0J6 103 aaKnown RBP8.12□□□□□ -1.11
TPM1-229ENST00000561242 MLXQ9UH92 298 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 HSPB11Q9Y547 144 aa8.12□□□□□ -1.11
TPM1-229ENST00000561242 WI2-2373I1.2A0A1W2PRP0 233 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 TAAR5O14804 337 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 PFDN1O60925 122 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 IL15RAQ13261 267 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 IL34Q6ZMJ4 242 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 TMEM61Q8N0U2 210 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 OR11H7Q8NGC8 314 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 C16orf92Q96LL3 132 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 PPP1R14DQ9NXH3 145 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 SELENOKQ9Y6D0 94 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 CUBNO60494 3623 aa8.11□□□□□ -1.11
TPM1-229ENST00000561242 hCG_2014768A0A024R1R8 64 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 KANTRA0A1W2PQU2 76 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 RPL29P47914 159 aaKnown RBP8.1□□□□□ -1.11
TPM1-229ENST00000561242 TAS2R45P59539 299 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 KRTAP10-11P60412 298 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 ACOT6Q3I5F7 207 aaPredicted RBP8.1□□□□□ -1.11
TPM1-229ENST00000561242 BPIFA4PQ86YQ2 179 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 LINC00052Q96N35 136 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 MFFQ9GZY8 342 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 ARV1Q9H2C2 271 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 MS4A6AQ9H2W1 248 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 VSIRQ9H7M9 311 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 ZFAND3Q9H8U3 227 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 SLC39A9Q9NUM3 307 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 WDR83OSQ9Y284 106 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 PXMP4Q9Y6I8 212 aa8.1□□□□□ -1.11
TPM1-229ENST00000561242 TRAV2A0A0B4J234 112 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 PMS2P5A8MQ11 134 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 ARPC5O15511 151 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 MBP02144 154 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 GATA2P23769 480 aaPredicted RBP8.09□□□□□ -1.11
TPM1-229ENST00000561242 APOC4P55056 127 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 NUTF2P61970 127 aaKnown RBP8.09□□□□□ -1.11
TPM1-229ENST00000561242 USF2Q15853 346 aaPredicted RBP8.09□□□□□ -1.11
TPM1-229ENST00000561242 EBLN2Q6P2I7 272 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 C16orf54Q6UWD8 224 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 LINC00305Q7Z4B0 112 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 AKAP14Q86UN6 197 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 STHQ8IWL8 128 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 GATAD1Q8WUU5 269 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 GNPNAT1Q96EK6 184 aaPredicted RBP8.09□□□□□ -1.11
TPM1-229ENST00000561242 RSG1Q9BU20 258 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 RNF126Q9BV68 326 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 SLC25A39Q9BZJ4 359 aaPredicted RBP8.09□□□□□ -1.11
TPM1-229ENST00000561242 NRN1Q9NPD7 142 aa8.09□□□□□ -1.11
TPM1-229ENST00000561242 IGKV1D-37A0A075B6S9 117 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 A0A0D9SG52 128 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 ZNF98A6NK75 572 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 PRSS46E5RG02 174 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 H0YIZ8 118 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 BUB3O43684 328 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 JTBO76095 146 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 ARL16Q0P5N6 197 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 FFAR4Q5NUL3 377 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 MIC13Q5XKP0 118 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 AQP10Q96PS8 301 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 MGST2Q99735 147 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 NPCDR1Q9BY65 106 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 WDR61Q9GZS3 305 aaKnown RBP8.08□□□□□ -1.12
TPM1-229ENST00000561242 SRD5A3Q9H8P0 318 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 UBQLN2Q9UHD9 624 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 TIMM9Q9Y5J7 89 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 PLXNB1O43157 2135 aa8.08□□□□□ -1.12
TPM1-229ENST00000561242 LOC102724200A0A096LPH7 203 aaPredicted RBP8.07□□□□□ -1.12
TPM1-229ENST00000561242 IZUMO1RA6ND01 250 aa8.07□□□□□ -1.12
TPM1-229ENST00000561242 APOHP02749 345 aaPredicted RBP8.07□□□□□ -1.12
TPM1-229ENST00000561242 NHLRC4P0CG21 123 aaPredicted RBP8.07□□□□□ -1.12
TPM1-229ENST00000561242 LYL1P12980 280 aa8.07□□□□□ -1.12
TPM1-229ENST00000561242 RHOBP62745 196 aa8.07□□□□□ -1.12
TPM1-229ENST00000561242 VWC2Q2TAL6 325 aa8.07□□□□□ -1.12
TPM1-229ENST00000561242 FAM78BQ5VT40 261 aa8.07□□□□□ -1.12
TPM1-229ENST00000561242 EIF5AL1Q6IS14 154 aaKnown RBP8.07□□□□□ -1.12
TPM1-229ENST00000561242 SHANK2-AS3Q9BTD1 123 aa8.07□□□□□ -1.12
TPM1-229ENST00000561242 RPRMQ9NS64 109 aa8.07□□□□□ -1.12
TPM1-229ENST00000561242 CLEC5AQ9NY25 188 aa8.07□□□□□ -1.12
TPM1-229ENST00000561242 CD7P09564 240 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 IGHV4-30-4P0DP06 118 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 DEFB131AP59861 70 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 PLP1P60201 277 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 OPCMLQ14982 345 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 GUK1Q16774 197 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 PSMG4Q5JS54 123 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 FAM74A1Q5RGS3 127 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 AKR1C8PQ5T2L2 129 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 DEFB125Q8N687 156 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 HSD17B11Q8NBQ5 300 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 CHAC2Q8WUX2 184 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 ARPC5LQ9BPX5 153 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 GGTLC1Q9BX51 225 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 MRPL32Q9BYC8 188 aaKnown RBP8.06□□□□□ -1.12
TPM1-229ENST00000561242 C11orf1Q9H5F2 150 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 LSM4Q9Y4Z0 139 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms