RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 RAB11AP62491 216 aa19.36■□□□□ 0.69
SNRPA1-215ENST00000561187 PYDC2Q56P42 97 aa19.36■□□□□ 0.69
SNRPA1-215ENST00000561187 TRIM63Q969Q1 353 aa19.36■□□□□ 0.69
SNRPA1-215ENST00000561187 SLC25A22Q9H936 323 aa19.36■□□□□ 0.69
SNRPA1-215ENST00000561187 PKHD1P08F94 4074 aa19.35■□□□□ 0.69
SNRPA1-215ENST00000561187 PITX3O75364 302 aa19.35■□□□□ 0.69
SNRPA1-215ENST00000561187 FABP1P07148 127 aa19.35■□□□□ 0.69
SNRPA1-215ENST00000561187 FAUP35544 74 aaKnown RBP19.35■□□□□ 0.69
SNRPA1-215ENST00000561187 TRGV9Q99603 122 aa19.35■□□□□ 0.69
SNRPA1-215ENST00000561187 BCL7BQ9BQE9 202 aa19.35■□□□□ 0.69
SNRPA1-215ENST00000561187 PLA2G2EQ9NZK7 142 aa19.35■□□□□ 0.69
SNRPA1-215ENST00000561187 SPART-AS1P0CW21 52 aa19.34■□□□□ 0.69
SNRPA1-215ENST00000561187 HTN3P15516 51 aa19.34■□□□□ 0.69
SNRPA1-215ENST00000561187 FAM78BQ5VT40 261 aa19.34■□□□□ 0.69
SNRPA1-215ENST00000561187 TOMM5Q8N4H5 51 aa19.34■□□□□ 0.69
SNRPA1-215ENST00000561187 C20orf173Q96LM9 149 aa19.34■□□□□ 0.69
SNRPA1-215ENST00000561187 DNAH17Q9UFH2 4485 aa19.34■□□□□ 0.69
SNRPA1-215ENST00000561187 H3BP45 60 aa19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 WRBO00258 174 aa19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 GATA2P23769 480 aaPredicted RBP19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 TMEM128Q5BJH2 165 aa19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 C1orf194Q5T5A4 169 aa19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 C16orf92Q96LL3 132 aa19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 NEU1Q99519 415 aa19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 C7orf50Q9BRJ6 194 aaKnown RBP19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 SLC25A32Q9H2D1 315 aa19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 RFNGQ9Y644 331 aa19.33■□□□□ 0.68
SNRPA1-215ENST00000561187 DUXBA0A1W2PPF3 345 aa19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 HOXB5P09067 269 aa19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 P0DMU3 169 aa19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 FAM231AP0DMU4 169 aa19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 FAM231CP0DMU5 169 aa19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 ATP5IP56385 69 aaPredicted RBP19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 FAM222AQ5U5X8 452 aa19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 EBLN2Q6P2I7 272 aa19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 POM121L12Q8N7R1 296 aa19.32■□□□□ 0.68
SNRPA1-215ENST00000561187 PSG9Q00887 426 aa19.31■□□□□ 0.68
SNRPA1-215ENST00000561187 PPP1R1AQ13522 171 aa19.31■□□□□ 0.68
SNRPA1-215ENST00000561187 ZNF79Q15937 498 aa19.31■□□□□ 0.68
SNRPA1-215ENST00000561187 THAP8Q8NA92 274 aa19.31■□□□□ 0.68
SNRPA1-215ENST00000561187 V9GYH0 126 aa19.31■□□□□ 0.68
SNRPA1-215ENST00000561187 TMEM189A5PLL7 270 aa19.3■□□□□ 0.68
SNRPA1-215ENST00000561187 ISLRO14498 428 aa19.3■□□□□ 0.68
SNRPA1-215ENST00000561187 AP3S2P59780 193 aa19.3■□□□□ 0.68
SNRPA1-215ENST00000561187 DKK2Q9UBU2 259 aa19.3■□□□□ 0.68
SNRPA1-215ENST00000561187 GOLT1BQ9Y3E0 138 aa19.3■□□□□ 0.68
SNRPA1-215ENST00000561187 A0A0J9YX75 114 aa19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 ORM2P19652 201 aa19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 AKR1C1Q04828 323 aa19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 SPANXN5Q5MJ07 72 aa19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 IGFL4Q6B9Z1 124 aa19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 TMEM182Q6ZP80 229 aaPredicted RBP19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 UBE2DNLQ8IWF7 75 aa19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 C1orf158Q8N1D5 194 aa19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 RSG1Q9BU20 258 aa19.29■□□□□ 0.68
SNRPA1-215ENST00000561187 IGLV2-18A0A075B6J9 118 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 LOC102723971A0A1B0GUV8 181 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 SMIM9A6NGZ8 99 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 SYNGR2O43760 224 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 MED6O75586 246 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 SFT2D2O95562 160 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 GALR1P47211 349 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 OR1B1Q8NGR6 318 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 NIPSNAP3BQ9BS92 247 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 RPRMQ9NS64 109 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 DOK5Q9P104 306 aa19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 YTHDF2Q9Y5A9 579 aaKnown RBP19.28■□□□□ 0.68
SNRPA1-215ENST00000561187 PCLOQ9Y6V0 5065 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 SMCO3A2RU48 225 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 PRSS46E5RG02 174 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 HBE1P02100 147 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 PAX9P55771 341 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 GGNBP1Q5YKI7 109 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 LINC00336Q6ZUF6 198 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 ACOT7LQ6ZUV0 252 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 LRTM2Q8N967 370 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 C17orf77Q96MU5 243 aa19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 CIB3Q96Q77 187 aaPredicted RBP19.27■□□□□ 0.68
SNRPA1-215ENST00000561187 PIGBOS1A0A0B4J2F0 54 aa19.26■□□□□ 0.67
SNRPA1-215ENST00000561187 ZNF98A6NK75 572 aa19.26■□□□□ 0.67
SNRPA1-215ENST00000561187 FGL1Q08830 312 aa19.26■□□□□ 0.67
SNRPA1-215ENST00000561187 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.26■□□□□ 0.67
SNRPA1-215ENST00000561187 TMED3Q9Y3Q3 217 aa19.26■□□□□ 0.67
SNRPA1-215ENST00000561187 CCDC160A6NGH7 325 aa19.25■□□□□ 0.67
SNRPA1-215ENST00000561187 PRB4P10163 310 aaPredicted RBP19.25■□□□□ 0.67
SNRPA1-215ENST00000561187 SLC25A6P12236 298 aa19.25■□□□□ 0.67
SNRPA1-215ENST00000561187 RPP30P78346 268 aaKnown RBP19.25■□□□□ 0.67
SNRPA1-215ENST00000561187 RNF182Q8N6D2 247 aa19.25■□□□□ 0.67
SNRPA1-215ENST00000561187 BPIFCQ8NFQ6 507 aa19.25■□□□□ 0.67
SNRPA1-215ENST00000561187 TMEM208Q9BTX3 173 aa19.25■□□□□ 0.67
SNRPA1-215ENST00000561187 TMEM147Q9BVK8 224 aa19.25■□□□□ 0.67
SNRPA1-215ENST00000561187 PRM2P04554 102 aa19.24■□□□□ 0.67
SNRPA1-215ENST00000561187 MEOX2P50222 304 aa19.24■□□□□ 0.67
SNRPA1-215ENST00000561187 RRN3P1Q2M238 152 aa19.24■□□□□ 0.67
SNRPA1-215ENST00000561187 SPATA31B1PQ5VZV4 182 aa19.24■□□□□ 0.67
SNRPA1-215ENST00000561187 CLUHP3Q96NS8 147 aa19.24■□□□□ 0.67
SNRPA1-215ENST00000561187 DYNC1H1Q14204 4646 aaKnown RBP19.24■□□□□ 0.67
SNRPA1-215ENST00000561187 PRSS29PA6NIE9 313 aa19.23■□□□□ 0.67
SNRPA1-215ENST00000561187 M0R2Z0 102 aa19.23■□□□□ 0.67
SNRPA1-215ENST00000561187 RTL8CO15255 209 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms