RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 F6UB75 175 aa9.18□□□□□ -0.94
CHRNA3-208ENST00000561128 H3BMM0 161 aa9.18□□□□□ -0.94
CHRNA3-208ENST00000561128 IFITM3Q01628 133 aa9.18□□□□□ -0.94
CHRNA3-208ENST00000561128 AKR1C1Q04828 323 aa9.18□□□□□ -0.94
CHRNA3-208ENST00000561128 TMEM14EPQ6UXP3 125 aa9.18□□□□□ -0.94
CHRNA3-208ENST00000561128 C11orf68Q9H3H3 251 aaKnown RBP9.18□□□□□ -0.94
CHRNA3-208ENST00000561128 DOK5Q9P104 306 aa9.18□□□□□ -0.94
CHRNA3-208ENST00000561128 DNAH1Q9P2D7 4330 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 PIGBOS1A0A0B4J2F0 54 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 CENPXA8MT69 81 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 IGKV3-20P01619 116 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 FXYD7P58549 80 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 IGFL4Q6B9Z1 124 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 CEMP1Q6PRD7 247 aaPredicted RBP9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 LINC00476Q8WZB0 136 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 SMIM8Q96KF7 97 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 GSKIPQ9P0R6 139 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 CELA1Q9UNI1 258 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 HYDINQ4G0P3 5121 aa9.17□□□□□ -0.94
CHRNA3-208ENST00000561128 ELOA3CA0A087WX78 387 aaPredicted RBP9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 SMCO3A2RU48 225 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 ZNF705EA8MWA4 302 aaPredicted RBP9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 H3BRN7 92 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 IFNA21P01568 189 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 SPP1P10451 314 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 HLA-DRB4P13762 266 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 ATF4P18848 351 aaPredicted RBP9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 ORM2P19652 201 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 SLC38A11Q08AI6 406 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 CYP2G1PQ6ZSU1 146 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 TMEM144Q7Z5S9 345 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 ZNF431Q8TF32 576 aaPredicted RBP9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 PHLDA1Q8WV24 401 aaPredicted RBP9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 UHRF2Q96PU4 802 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 CCDC32Q9BV29 185 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 SLC25A22Q9H936 323 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 HLA-DRB4X5D2U9 266 aa9.16□□□□□ -0.94
CHRNA3-208ENST00000561128 TRAV8-2A0A0B4J237 113 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 C7orf66A4D0T2 115 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 ZNF98A6NK75 572 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 SNRPGP15A8MWD9 76 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 K7EPK0 472 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 MORN5Q5VZ52 161 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 PATE2Q6UY27 113 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 ZNF709Q8N972 641 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 OR1B1Q8NGR6 318 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 PPP1R14BQ96C90 147 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 LINC00052Q96N35 136 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 XCL2Q9UBD3 114 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 FBXL17Q9UF56 701 aa9.15□□□□□ -0.94
CHRNA3-208ENST00000561128 NUPR2A6NF83 97 aa9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 JTBO76095 146 aa9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 H2AFB2P0C5Z0 115 aa9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 HLA-DMBP28068 263 aa9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 AP2S1P53680 142 aaPredicted RBP9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 RPP30P78346 268 aaKnown RBP9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 DLK1P80370 383 aa9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 C1orf194Q5T5A4 169 aa9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 OR8I2Q8N0Y5 310 aa9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 SLC35B3Q9H1N7 401 aa9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 SAV1Q9H4B6 383 aaPredicted RBP9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 LSM5Q9Y4Y9 91 aaKnown RBP9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 PLECQ15149 4684 aaKnown RBP9.14□□□□□ -0.95
CHRNA3-208ENST00000561128 FAM25EA8MYX2 175 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 TSC22D2O75157 780 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 FABP1P07148 127 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 LINC00869P0C866 280 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 ZNF705DP0CH99 300 aaPredicted RBP9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 ZNF705BP0CI00 300 aaPredicted RBP9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 PSMB3P49720 205 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 SNRPD3P62318 126 aaKnown RBP9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 IL15RAQ13261 267 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 ASAH1Q13510 395 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 ZNF767PQ75MW2 155 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 RNF182Q8N6D2 247 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 BPIFCQ8NFQ6 507 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 MGST2Q99735 147 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 SHANK2-AS3Q9BTD1 123 aa9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 SLC25A39Q9BZJ4 359 aaPredicted RBP9.13□□□□□ -0.95
CHRNA3-208ENST00000561128 IGSF23A1L1A6 192 aa9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 FAM24AA6NFZ4 105 aa9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 MRPS12O15235 138 aaKnown RBP9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 UPK1BO75841 260 aa9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 IL5P05113 134 aa9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 SNRPCP09234 159 aaKnown RBP9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 NUP62P37198 522 aaPredicted RBP9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 AMTNQ6UX39 209 aa9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 C12orf45Q8N5I9 185 aaPredicted RBP9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 C11orf45Q8TAV5 145 aa9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 RSG1Q9BU20 258 aa9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 TMEM147Q9BVK8 224 aa9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 SEPSECSQ9HD40 501 aaKnown RBP9.12□□□□□ -0.95
CHRNA3-208ENST00000561128 A0A0J9YX75 114 aa9.11□□□□□ -0.95
CHRNA3-208ENST00000561128 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
CHRNA3-208ENST00000561128 A8MTW9 85 aa9.11□□□□□ -0.95
CHRNA3-208ENST00000561128 CST7O76096 145 aa9.11□□□□□ -0.95
CHRNA3-208ENST00000561128 SIX6O95475 246 aa9.11□□□□□ -0.95
CHRNA3-208ENST00000561128 LY6G6CO95867 125 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms