RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 C9orf170A2RU37 121 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 SMIM9A6NGZ8 99 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 H3BMM0 161 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 C4BPBP20851 252 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 ZNF90Q03938 601 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 C4orf46Q504U0 113 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 SPANXN5Q5MJ07 72 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 OR4D5Q8NGN0 318 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 OR1B1Q8NGR6 318 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 TMEM147Q9BVK8 224 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 RPRMQ9NS64 109 aa10.24□□□□□ -0.77
TPM1-223ENST00000560445 AGRNO00468 2067 aa10.23□□□□□ -0.77
TPM1-223ENST00000560445 IGKV1D-37A0A075B6S9 117 aa10.23□□□□□ -0.77
TPM1-223ENST00000560445 GIG44P09565 113 aaPredicted RBP10.23□□□□□ -0.77
TPM1-223ENST00000560445 OR4E1P0C645 316 aa10.23□□□□□ -0.77
TPM1-223ENST00000560445 SELENOTP62341 195 aa10.23□□□□□ -0.77
TPM1-223ENST00000560445 LINC00052Q96N35 136 aa10.23□□□□□ -0.77
TPM1-223ENST00000560445 MAGT1Q9H0U3 335 aa10.23□□□□□ -0.77
TPM1-223ENST00000560445 ALMS1Q8TCU4 4167 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 DEFB4AO15263 64 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 IL7P13232 177 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 HLA-DMBP28068 263 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 RAP2BP61225 183 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 OR2F1Q13607 317 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 CSNK1G2-AS1Q8NCQ2 148 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 NEU1Q99519 415 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 SAV1Q9H4B6 383 aaPredicted RBP10.22□□□□□ -0.77
TPM1-223ENST00000560445 GOLT1BQ9Y3E0 138 aa10.22□□□□□ -0.77
TPM1-223ENST00000560445 FNDC10F2Z333 226 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 AMBPP02760 352 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 TMEM144Q7Z5S9 345 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 C16orf92Q96LL3 132 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 XCL2Q9UBD3 114 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 MGAT4CQ9UBM8 478 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 FLVCR2Q9UPI3 526 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 X6R8D5 127 aa10.21□□□□□ -0.77
TPM1-223ENST00000560445 SMCO3A2RU48 225 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 IGLL5B9A064 214 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 ADAP1O75689 374 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 RBMY1A1P0DJD3 496 aaKnown RBP10.2□□□□□ -0.78
TPM1-223ENST00000560445 RBMY1CP0DJD4 496 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 RPL7P18124 248 aaKnown RBP10.2□□□□□ -0.78
TPM1-223ENST00000560445 PAX9P55771 341 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 TAS2R30P59541 319 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 ID3Q02535 119 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 RBMY1FQ15415 496 aaKnown RBP10.2□□□□□ -0.78
TPM1-223ENST00000560445 ACOT7LQ6ZUV0 252 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 RNF126Q9BV68 326 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 PSENENQ9NZ42 101 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 RFNGQ9Y644 331 aa10.2□□□□□ -0.78
TPM1-223ENST00000560445 PRSS46E5RG02 174 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 H3BP45 60 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 SSSCA1O60232 199 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 DUSP14O95147 198 aaKnown RBP10.19□□□□□ -0.78
TPM1-223ENST00000560445 IL5P05113 134 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 SPART-AS1P0CW21 52 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 ORM2P19652 201 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 ANXA7P20073 488 aaKnown RBP10.19□□□□□ -0.78
TPM1-223ENST00000560445 PSG9Q00887 426 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 ZNF846Q147U1 533 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 PXDC1Q5TGL8 231 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 ZNF705AQ6ZN79 300 aaPredicted RBP10.19□□□□□ -0.78
TPM1-223ENST00000560445 OR10P1Q8NGE3 313 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 OR4B1Q8NGF8 309 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 SMIM8Q96KF7 97 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 SDHCQ99643 169 aaPredicted RBP10.19□□□□□ -0.78
TPM1-223ENST00000560445 SLC25A22Q9H936 323 aa10.19□□□□□ -0.78
TPM1-223ENST00000560445 PLECQ15149 4684 aaKnown RBP10.18□□□□□ -0.78
TPM1-223ENST00000560445 IGKV1OR2-108A0A075B7D4 117 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 ZNF98A6NK75 572 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 SOCS3O14543 225 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 LYRM1O43325 122 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 TSC22D2O75157 780 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 HYPMO75409 117 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 B2MP61769 119 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 POLR2GP62487 172 aaKnown RBP eCLIP10.18□□□□□ -0.78
TPM1-223ENST00000560445 DLK1P80370 383 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 IAH1Q2TAA2 248 aaPredicted RBP10.18□□□□□ -0.78
TPM1-223ENST00000560445 FAM210BQ96KR6 192 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 CCDC32Q9BV29 185 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 WDR12Q9GZL7 423 aaKnown RBP10.18□□□□□ -0.78
TPM1-223ENST00000560445 GSKIPQ9P0R6 139 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 DOK5Q9P104 306 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 HIGD1AQ9Y241 93 aa10.18□□□□□ -0.78
TPM1-223ENST00000560445 DEFB131BA0A096LNP1 70 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 ZNF705FA8MVS1 300 aaPredicted RBP10.17□□□□□ -0.78
TPM1-223ENST00000560445 SCGB1D2O95969 90 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 HBE1P02100 147 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 ZNF705DP0CH99 300 aaPredicted RBP10.17□□□□□ -0.78
TPM1-223ENST00000560445 ZNF705BP0CI00 300 aaPredicted RBP10.17□□□□□ -0.78
TPM1-223ENST00000560445 LINC00299Q6ZSB3 139 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 CYP2G1PQ6ZSU1 146 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 Q6ZTC4 211 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 ZNF546Q86UE3 836 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 MITD1Q8WV92 249 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 RSG1Q9BU20 258 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 GGACTQ9BVM4 153 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 C20orf85Q9H1P6 137 aa10.17□□□□□ -0.78
TPM1-223ENST00000560445 SLC25A32Q9H2D1 315 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms