RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 SIRPDQ9H106 197 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 C7orf69Q9H7B7 122 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 RPH3ALQ9UNE2 315 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 S4R3C0 116 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 LINC00310P59036 64 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 Q8N6K4 173 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 OR5R1Q8NH85 324 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 MBD6Q96DN6 1003 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 BBC3Q96PG8 261 aaPredicted RBP8.72□□□□□ -1.01
SPG11-217ENST00000559511 RBM14Q96PK6 669 aaKnown RBP8.72□□□□□ -1.01
SPG11-217ENST00000559511 GNB1LQ9BYB4 327 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 BPESC1Q9GZL8 116 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 Q9H3A6 140 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 MRPL27Q9P0M9 148 aaKnown RBP8.72□□□□□ -1.01
SPG11-217ENST00000559511 ABCA2Q9BZC7 2435 aa8.72□□□□□ -1.01
SPG11-217ENST00000559511 TRBV9A0A0B4J1U6 114 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 NCBP2LA6PVI3 153 aaKnown RBP8.71□□□□□ -1.01
SPG11-217ENST00000559511 IGHV4-39P01824 125 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 LMO4P61968 165 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 UBE2G1P62253 170 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 C9orf152Q5JTZ5 239 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 PRR27Q6MZM9 219 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 CCDC144NLQ6NUI1 221 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 MRPL54Q6P161 138 aaKnown RBP8.71□□□□□ -1.01
SPG11-217ENST00000559511 TMEM136Q6ZRR5 245 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 FAM231DQ6ZW35 169 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 NUDT10Q8NFP7 164 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 NUDT11Q96G61 164 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 ZNF586Q9NXT0 402 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 KLF12Q9Y4X4 402 aa8.71□□□□□ -1.01
SPG11-217ENST00000559511 TRAV20A0A0B4J274 112 aa8.71□□□□□ -1.02
SPG11-217ENST00000559511 F2Z2F3 143 aa8.71□□□□□ -1.02
SPG11-217ENST00000559511 ZNF562Q6V9R5 426 aa8.71□□□□□ -1.02
SPG11-217ENST00000559511 C5orf17Q8NAS9 161 aa8.71□□□□□ -1.02
SPG11-217ENST00000559511 ARPC1AQ92747 370 aa8.71□□□□□ -1.02
SPG11-217ENST00000559511 FANCD2OSQ96PS1 177 aa8.71□□□□□ -1.02
SPG11-217ENST00000559511 ATG101Q9BSB4 218 aa8.71□□□□□ -1.02
SPG11-217ENST00000559511 NAT8BQ9UHF3 227 aa8.71□□□□□ -1.02
SPG11-217ENST00000559511 IGLV11-55A0A075B6I3 123 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 IGHV2-70DA0A0C4DH43 119 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 TCRAP04437 139 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 CRISP2P16562 243 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 EBI3Q14213 229 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 MINOS1Q5TGZ0 78 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 TMEM14CQ9P0S9 112 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 MINOS1-NBL1R4GNA1 71 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 ZFYVE26Q68DK2 2539 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 EPG5Q9HCE0 2579 aa8.7□□□□□ -1.02
SPG11-217ENST00000559511 IZUMO1RA6ND01 250 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 NPIPB5A8MRT5 1133 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 OOSP1A8MZH6 123 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 GATCO43716 136 aaKnown RBP8.69□□□□□ -1.02
SPG11-217ENST00000559511 TOX4O94842 621 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 GOSR1O95249 250 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 TOMM40O96008 361 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 AMY1AP04745 511 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 WDR73Q6P4I2 378 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 LINC00322Q6ZN03 302 aaPredicted RBP8.69□□□□□ -1.02
SPG11-217ENST00000559511 BCL6BQ8N143 479 aaPredicted RBP8.69□□□□□ -1.02
SPG11-217ENST00000559511 EXOC3-AS1Q8N2X6 119 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 ZNF491Q8N8L2 437 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 CMTM2Q8TAZ6 248 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 AJUBAQ96IF1 538 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 GPR82Q96P67 336 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 TBX15Q96SF7 602 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 MLST8Q9BVC4 326 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 CELSR2Q9HCU4 2923 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 F8W735 103 aaPredicted RBP8.69□□□□□ -1.02
SPG11-217ENST00000559511 H3BRN7 92 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 SERF1AO75920 110 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 LTAP01374 205 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 MT-ND6P03923 174 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 HIST1H1EP10412 219 aaKnown RBP8.69□□□□□ -1.02
SPG11-217ENST00000559511 TMEM11P17152 192 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 RAB4BP61018 213 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 FAM120AOSQ5T036 256 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 RNF125Q96EQ8 232 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 GRAMD2BQ96HH9 432 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 FMC1Q96HJ9 113 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 SHANK2-AS3Q9BTD1 123 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 PRO1933Q9H354 126 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 OTORQ9NRC9 128 aa8.69□□□□□ -1.02
SPG11-217ENST00000559511 IL4P05112 153 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 RPL19P84098 196 aaKnown RBP8.68□□□□□ -1.02
SPG11-217ENST00000559511 TTC9CQ8N5M4 171 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 NUP35Q8NFH5 326 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 SMIM12Q96EX1 92 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 TMEM68Q96MH6 324 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 C17orf77Q96MU5 243 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 UTP20O75691 2785 aaKnown RBP8.68□□□□□ -1.02
SPG11-217ENST00000559511 MYO18BQ8IUG5 2567 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 TRAV8-1A0A0A6YYK1 113 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 WI2-2373I1.2A0A1W2PRP0 233 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 GNG7O60262 68 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 IGLC2P0DOY2 106 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 ESDP10768 282 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 EGR2P11161 476 aaPredicted RBP8.68□□□□□ -1.02
SPG11-217ENST00000559511 PKIAP61925 76 aa8.68□□□□□ -1.02
SPG11-217ENST00000559511 Q0VG73 95 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms