RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 PTTG2Q9NZH5 202 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 DOK5Q9P104 306 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 MGAT4CQ9UBM8 478 aa6.02□□□□□ -1.45
SNX1-207ENST00000559401 TSC22D2O75157 780 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 JTBO76095 146 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 MBPP02686 304 aaPredicted RBP6.01□□□□□ -1.45
SNX1-207ENST00000559401 SPP1P10451 314 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 S100A7P31151 101 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 ID1P41134 155 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 CAV2P51636 162 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 DLK1P80370 383 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 ASAH1Q13510 395 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 C1orf194Q5T5A4 169 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 MORN3Q6PF18 240 aaPredicted RBP6.01□□□□□ -1.45
SNX1-207ENST00000559401 GSG1LQ6UXU4 331 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 CYP2G1PQ6ZSU1 146 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 TMEM144Q7Z5S9 345 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 TRPT1Q86TN4 253 aaKnown RBP6.01□□□□□ -1.45
SNX1-207ENST00000559401 GATAD1Q8WUU5 269 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 LINC00052Q96N35 136 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 TBC1D24Q9ULP9 559 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 AGRNO00468 2067 aa6.01□□□□□ -1.45
SNX1-207ENST00000559401 LCE6AA0A183 80 aa6□□□□□ -1.45
SNX1-207ENST00000559401 C7orf66A4D0T2 115 aa6□□□□□ -1.45
SNX1-207ENST00000559401 DEFB4AO15263 64 aa6□□□□□ -1.45
SNX1-207ENST00000559401 UPK1BO75841 260 aa6□□□□□ -1.45
SNX1-207ENST00000559401 IGKV3-20P01619 116 aa6□□□□□ -1.45
SNX1-207ENST00000559401 OR5G3P0C626 314 aa6□□□□□ -1.45
SNX1-207ENST00000559401 PVALBP20472 110 aaPredicted RBP6□□□□□ -1.45
SNX1-207ENST00000559401 GALR1P47211 349 aa6□□□□□ -1.45
SNX1-207ENST00000559401 PAX9P55771 341 aa6□□□□□ -1.45
SNX1-207ENST00000559401 TAS2R30P59541 319 aa6□□□□□ -1.45
SNX1-207ENST00000559401 RAP2BP61225 183 aa6□□□□□ -1.45
SNX1-207ENST00000559401 EWSR1Q01844 656 aaKnown RBP eCLIP6□□□□□ -1.45
SNX1-207ENST00000559401 FGL1Q08830 312 aa6□□□□□ -1.45
SNX1-207ENST00000559401 TMEM41BQ5BJD5 291 aa6□□□□□ -1.45
SNX1-207ENST00000559401 TMEM14EPQ6UXP3 125 aa6□□□□□ -1.45
SNX1-207ENST00000559401 TMEM182Q6ZP80 229 aaPredicted RBP6□□□□□ -1.45
SNX1-207ENST00000559401 C2orf50Q96LR7 162 aa6□□□□□ -1.45
SNX1-207ENST00000559401 SLC25A32Q9H2D1 315 aa6□□□□□ -1.45
SNX1-207ENST00000559401 CLEC5AQ9NY25 188 aa6□□□□□ -1.45
SNX1-207ENST00000559401 ZNF98A6NK75 572 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 PMS2P5A8MQ11 134 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 K7EPK0 472 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 GOSR2O14653 212 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 HYPMO75409 117 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 LINC00869P0C866 280 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 ATF4P18848 351 aaPredicted RBP5.99□□□□□ -1.45
SNX1-207ENST00000559401 C4BPBP20851 252 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 PSMB3P49720 205 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 MEOX2P50222 304 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 DEFB1P60022 68 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 NUTF2P61970 127 aaKnown RBP5.99□□□□□ -1.45
SNX1-207ENST00000559401 SELENOTP62341 195 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 SLC38A11Q08AI6 406 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 TEPPQ6URK8 271 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 OR4B1Q8NGF8 309 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 C16orf92Q96LL3 132 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 RSG1Q9BU20 258 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 SCRT1Q9BWW7 348 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 GPN1Q9HCN4 374 aaPredicted RBP5.99□□□□□ -1.45
SNX1-207ENST00000559401 NPVFQ9HCQ7 196 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 SEPSECSQ9HD40 501 aaKnown RBP5.99□□□□□ -1.45
SNX1-207ENST00000559401 SLC45A2Q9UMX9 530 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 HIGD1AQ9Y241 93 aa5.99□□□□□ -1.45
SNX1-207ENST00000559401 NUPR2A6NF83 97 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 FAM24AA6NFZ4 105 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 H3BMM0 161 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 ISLRO14498 428 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 CST7O76096 145 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 HLA-DRB4P13762 266 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 DEFA1P59665 94 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 DEFA3P59666 94 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 RAB32Q13637 225 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 SAMD13Q5VXD3 122 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 EBLN2Q6P2I7 272 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 S100A7AQ86SG5 101 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 ZNF546Q86UE3 836 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 STX12Q86Y82 276 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 C11orf45Q8TAV5 145 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 LRRC20Q8TCA0 184 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 GPR82Q96P67 336 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 UHRF2Q96PU4 802 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 C1QTNF4Q9BXJ3 329 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 ARL6Q9H0F7 186 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 RPRMQ9NS64 109 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 XCL2Q9UBD3 114 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 HLA-DRB4X5D2U9 266 aa5.98□□□□□ -1.45
SNX1-207ENST00000559401 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
SNX1-207ENST00000559401 TENM2Q9NT68 2774 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 IGHV4-28A0A0C4DH34 117 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 FNDC10F2Z333 226 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 INMT-MINDY4F8WBC2 141 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 H3BRN7 92 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 SOCS3O14543 225 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 COX7A2P2O60397 106 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 SIX6O95475 246 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 FXYD7P58549 80 aa5.97□□□□□ -1.45
SNX1-207ENST00000559401 NANOS2P60321 138 aaKnown RBP5.97□□□□□ -1.45
SNX1-207ENST00000559401 ARL16Q0P5N6 197 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms