RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 B9D2Q9BPU9 175 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 PBDC1Q9BVG4 233 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 TMEM147Q9BVK8 224 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 MS4A6AQ9H2W1 248 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 UQCC1Q9NVA1 299 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 UBQLN2Q9UHD9 624 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 RABAC1Q9UI14 185 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 HSPB11Q9Y547 144 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 SMAD5-AS1Q9Y6J3 95 aa8.5□□□□□ -1.05
SNX1-204ENST00000559061 H3BRN7 92 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 K7EQG2 157 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 SOCS3O14543 225 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 SCGB2A1O75556 95 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 S100A11P31949 105 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 TFPI2P48307 235 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 OPCMLQ14982 345 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 DEFB121Q5J5C9 76 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 LEMD1Q68G75 181 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 RBPMS2Q6ZRY4 209 aaKnown RBP8.49□□□□□ -1.05
SNX1-204ENST00000559061 STX12Q86Y82 276 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 SBSPONQ8IVN8 264 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 UHRF2Q96PU4 802 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 SCRT1Q9BWW7 348 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 SLC25A32Q9H2D1 315 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 DOK5Q9P104 306 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 RFNGQ9Y644 331 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 TENM3Q9P273 2699 aa8.49□□□□□ -1.05
SNX1-204ENST00000559061 RNF222A6NCQ9 220 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 SMLR1H3BR10 107 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 MRPS12O15235 138 aaKnown RBP8.48□□□□□ -1.05
SNX1-204ENST00000559061 BAXQ07812 192 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 CLINT1Q14677 625 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 MIC13Q5XKP0 118 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 Q6ZNX1 250 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 GTSCR1Q86UQ5 136 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 OR1B1Q8NGR6 318 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 THAP6Q8TBB0 222 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 TMEM37Q8WXS4 190 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 MAP6D1Q9H9H5 199 aa8.48□□□□□ -1.05
SNX1-204ENST00000559061 TRAV2A0A0B4J234 112 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 ZNF98A6NK75 572 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 OR11H12B2RN74 326 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 RLN2P04090 185 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 FABP1P07148 127 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 ORM2P19652 201 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 FGF7P21781 194 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 RPL12P30050 165 aaKnown RBP8.47□□□□□ -1.05
SNX1-204ENST00000559061 HBG1P69891 147 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 HBG2P69892 147 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 LAMTOR1Q6IAA8 161 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 ZNF546Q86UE3 836 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 APRG1Q8IVJ8 170 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 ASCL2Q99929 193 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 SHANK2-AS3Q9BTD1 123 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 NPCDR1Q9BY65 106 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 SLC25A39Q9BZJ4 359 aaPredicted RBP8.47□□□□□ -1.05
SNX1-204ENST00000559061 SMIM3Q9BZL3 60 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 SLC25A31Q9H0C2 315 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 SRD5A3Q9H8P0 318 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 AGRNO00468 2067 aa8.47□□□□□ -1.05
SNX1-204ENST00000559061 A0A1W2PS18 150 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 OR4C46A6NHA9 309 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 CFDP00746 253 aaPredicted RBP8.46□□□□□ -1.06
SNX1-204ENST00000559061 PET100P0DJ07 73 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 CAMLGP49069 296 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 RAP2BP61225 183 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 SELENOTP62341 195 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 ATP6V1FQ16864 119 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 GCSAMLQ5JQS6 135 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 SIGLEC15Q6ZMC9 328 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 WFDC3Q8IUB2 231 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 STXBP6Q8NFX7 210 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 OR2T35Q8NGX2 323 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 ASB13Q8WXK3 278 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 AQP10Q96PS8 301 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 ATP5SQ99766 215 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 FAM110AQ9BQ89 295 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 WDR61Q9GZS3 305 aaKnown RBP8.46□□□□□ -1.06
SNX1-204ENST00000559061 ARL6Q9H0F7 186 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 TMEM231Q9H6L2 316 aa8.46□□□□□ -1.06
SNX1-204ENST00000559061 HYPMO75409 117 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 BMI1P35226 326 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 RPL29P47914 159 aaKnown RBP8.45□□□□□ -1.06
SNX1-204ENST00000559061 DEFB1P60022 68 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 C1orf194Q5T5A4 169 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 OR11H4Q8NGC9 324 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 C20orf173Q96LM9 149 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 ARV1Q9H2C2 271 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 SLC39A9Q9NUM3 307 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 FBXL17Q9UF56 701 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 TNFSF18Q9UNG2 199 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 HIGD1AQ9Y241 93 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 PXMP4Q9Y6I8 212 aa8.45□□□□□ -1.06
SNX1-204ENST00000559061 TRAV8-2A0A0B4J237 113 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 TRAV5A0A0B4J249 113 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 CD5P06127 495 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 ZNF688P0C7X2 276 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 B2MP61769 119 aa8.44□□□□□ -1.06
SNX1-204ENST00000559061 HAGHQ16775 308 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms