RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 PRSS54Q6PEW0 395 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 SIGLEC15Q6ZMC9 328 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 SNX29P2Q8IUI4 249 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 ZNF709Q8N972 641 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 OR1S2Q8NGQ3 325 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 FAM210BQ96KR6 192 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 NIPSNAP3BQ9BS92 247 aa6.83□□□□□ -1.32
SPG11-212ENST00000558790 RPS10-NUDT3A0A1W2PQS6 291 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 CDK2AP2O75956 126 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 NKX2-1P43699 371 aaPredicted RBP6.82□□□□□ -1.32
SPG11-212ENST00000558790 AP2S1P53680 142 aaPredicted RBP6.82□□□□□ -1.32
SPG11-212ENST00000558790 YPEL3P61236 119 aaPredicted RBP6.82□□□□□ -1.32
SPG11-212ENST00000558790 LSM3P62310 102 aaKnown RBP6.82□□□□□ -1.32
SPG11-212ENST00000558790 TRIM16LQ309B1 348 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 SP6Q3SY56 376 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 RNF212Q495C1 297 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 TMEM88Q6PEY1 159 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 LHFPL1Q86WI0 220 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 RNASE11Q8TAA1 199 aaKnown RBP6.82□□□□□ -1.32
SPG11-212ENST00000558790 ZNF486Q96H40 463 aaPredicted RBP6.82□□□□□ -1.32
SPG11-212ENST00000558790 SCPEP1Q9HB40 452 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 RFNGQ9Y644 331 aa6.82□□□□□ -1.32
SPG11-212ENST00000558790 C3orf85A0A1B0GTC6 90 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 TEX48A0A1B0GUV7 120 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 SMIM9A6NGZ8 99 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 BUB3O43684 328 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 ATG12O94817 140 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 HTR2BP41595 481 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 AARDQ4LEZ3 155 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 SLC24A4Q8NFF2 622 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 Q8WTZ3 238 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 TMEM170AQ8WVE7 144 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 YTHDF1Q9BYJ9 559 aaKnown RBP6.81□□□□□ -1.32
SPG11-212ENST00000558790 SLC35B3Q9H1N7 401 aa6.81□□□□□ -1.32
SPG11-212ENST00000558790 SAV1Q9H4B6 383 aaPredicted RBP6.81□□□□□ -1.32
SPG11-212ENST00000558790 YTHDF2Q9Y5A9 579 aaKnown RBP6.81□□□□□ -1.32
SPG11-212ENST00000558790 GSTZ1O43708 216 aaPredicted RBP6.8□□□□□ -1.32
SPG11-212ENST00000558790 TOMM40O96008 361 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 APOA1P02647 267 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 SLC25A4P12235 298 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 UCP1P25874 307 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 PCP4P48539 62 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 SPCS3P61009 180 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 C2orf83Q53S99 150 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 GSG1LQ6UXU4 331 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 LHFPL5Q8TAF8 219 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 RNASEH2CQ8TDP1 164 aaKnown RBP6.8□□□□□ -1.32
SPG11-212ENST00000558790 RRNAD1Q96FB5 475 aaKnown RBP6.8□□□□□ -1.32
SPG11-212ENST00000558790 ACY3Q96HD9 319 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 Q9H521 79 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 SCRT2Q9NQ03 307 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 COMMD3Q9UBI1 195 aa6.8□□□□□ -1.32
SPG11-212ENST00000558790 SOCS3O14543 225 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 CD3DP04234 171 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 PSG1P11464 419 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 ELK1P19419 428 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 RORCP51449 518 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 OXA1LQ15070 435 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 ZNF79Q15937 498 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 RNASE10Q5GAN6 216 aaKnown RBP6.79□□□□□ -1.32
SPG11-212ENST00000558790 FOXI2Q6ZQN5 318 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 C1orf158Q8N1D5 194 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 ARRDC1Q8N5I2 433 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 CCDC71LQ8N9Z2 235 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 OR4B1Q8NGF8 309 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 OR4D10Q8NGI6 311 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 OR51G1Q8NGK1 321 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 OR13C8Q8NGS7 320 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 OR52E5Q8NH55 327 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 GPR146Q96CH1 333 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 YIPF6Q96EC8 236 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 RNF125Q96EQ8 232 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 LINC00052Q96N35 136 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 COPZ2Q9P299 210 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 CACNG5Q9UF02 275 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 GOLT1BQ9Y3E0 138 aa6.79□□□□□ -1.32
SPG11-212ENST00000558790 SMIM31A0A1B0GVY4 71 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 F6UB75 175 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 HPGDSO60760 199 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 HBE1P02100 147 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 OR5AC1P0C628 307 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 RD3LP0DJH9 198 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 PSMB3P49720 205 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 DAD1P61803 113 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 FAM219AQ8IW50 185 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 COQ8AQ8NI60 647 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 C7orf50Q9BRJ6 194 aaKnown RBP6.78□□□□□ -1.32
SPG11-212ENST00000558790 PBDC1Q9BVG4 233 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 TMEM222Q9H0R3 208 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.78□□□□□ -1.32
SPG11-212ENST00000558790 KLK11Q9UBX7 282 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 TMED3Q9Y3Q3 217 aa6.78□□□□□ -1.32
SPG11-212ENST00000558790 NBDYA0A0U1RRE5 68 aa6.77□□□□□ -1.33
SPG11-212ENST00000558790 CEBPZOSA8MTT3 80 aa6.77□□□□□ -1.33
SPG11-212ENST00000558790 ATP6V1G2O95670 118 aa6.77□□□□□ -1.33
SPG11-212ENST00000558790 CDS2O95674 445 aa6.77□□□□□ -1.33
SPG11-212ENST00000558790 NUP62P37198 522 aaPredicted RBP6.77□□□□□ -1.33
SPG11-212ENST00000558790 PAX9P55771 341 aa6.77□□□□□ -1.33
SPG11-212ENST00000558790 NCS1P62166 190 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms