RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 LY6EQ16553 131 aa10.1□□□□□ -0.79
SMAD3-207ENST00000558763 RNF212Q495C1 297 aa10.1□□□□□ -0.79
SMAD3-207ENST00000558763 LINC01551Q86U37 167 aa10.1□□□□□ -0.79
SMAD3-207ENST00000558763 ZNF491Q8N8L2 437 aa10.1□□□□□ -0.79
SMAD3-207ENST00000558763 PAXXQ9BUH6 204 aa10.1□□□□□ -0.79
SMAD3-207ENST00000558763 OR51M1Q9H341 326 aa10.1□□□□□ -0.79
SMAD3-207ENST00000558763 C21orf62Q9NYP8 219 aa10.1□□□□□ -0.79
SMAD3-207ENST00000558763 CDC42EP3Q9UKI2 254 aa10.1□□□□□ -0.79
SMAD3-207ENST00000558763 TEP1Q99973 2627 aaKnown RBP10.09□□□□□ -0.79
SMAD3-207ENST00000558763 LOC105371267A0A1B0GV96 52 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 WI2-2373I1.2A0A1W2PRP0 233 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 PGPEP1LA6NFU8 196 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 OR2C1O95371 312 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 IGHV4-59P01825 116 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 RD3LP0DJH9 198 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 SRD5A1P18405 259 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 MYCNOSP40205 109 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 MFAP4P55083 255 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 YPEL3P61236 119 aaPredicted RBP10.09□□□□□ -0.79
SMAD3-207ENST00000558763 LYZP61626 148 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 ADIRFQ15847 76 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 C2CD4CQ8TF44 421 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 TMEM242Q9NWH2 141 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 FBXL7Q9UJT9 491 aa10.09□□□□□ -0.79
SMAD3-207ENST00000558763 ATF4P18848 351 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-207ENST00000558763 ADMP35318 185 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 LEMD1Q68G75 181 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 FAM24BQ8N5W8 94 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 SIGLECL1Q8N7X8 197 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 ELOVL1Q9BW60 279 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 SLC25A39Q9BZJ4 359 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-207ENST00000558763 HIGD1AQ9Y241 93 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 CXorf65A6NEN9 183 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 GNG7O60262 68 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 IGHV3-23P01764 117 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 MT-ND4LP03901 98 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 CRYBA1P05813 215 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 CTSGP08311 255 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 FOLR2P14207 255 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 ELOBQ15370 118 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 USF2Q15853 346 aaPredicted RBP10.08□□□□□ -0.8
SMAD3-207ENST00000558763 C16orf82Q7Z2V1 217 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 ZNF502Q8TBZ5 544 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 VN1R17PQ8TDU5 208 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 RNF125Q96EQ8 232 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 TMEM68Q96MH6 324 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 CHRDL1Q9BU40 450 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 THYN1Q9P016 225 aa10.08□□□□□ -0.8
SMAD3-207ENST00000558763 FN1P02751 2386 aaKnown RBP10.07□□□□□ -0.8
SMAD3-207ENST00000558763 TRAV30A0A087WSZ9 112 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 H3BRN7 92 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 HOXA3O43365 443 aaPredicted RBP10.07□□□□□ -0.8
SMAD3-207ENST00000558763 HIST1H1BP16401 226 aaKnown RBP10.07□□□□□ -0.8
SMAD3-207ENST00000558763 RHOGP84095 191 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 C15orf32Q32M92 178 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 Q6YL49 198 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 Q6ZS46 218 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 Q8WTZ3 238 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 CCDC140Q96MF4 163 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 DUX5Q96PT3 197 aa10.07□□□□□ -0.8
SMAD3-207ENST00000558763 NIPBLQ6KC79 2804 aaeCLIP10.07□□□□□ -0.8
SMAD3-207ENST00000558763 OR2T8A6NH00 312 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 C9JCJ5 164 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 IGHG2P01859 326 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 IGF1P05019 195 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 SNRPCP09234 159 aaKnown RBP10.06□□□□□ -0.8
SMAD3-207ENST00000558763 CRYBB3P26998 211 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 RPL35P42766 123 aaKnown RBP10.06□□□□□ -0.8
SMAD3-207ENST00000558763 IER3P46695 156 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 SUMO1P63165 101 aaKnown RBP10.06□□□□□ -0.8
SMAD3-207ENST00000558763 ZNF329Q86UD4 541 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 STXBP6Q8NFX7 210 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 SHANK2-AS3Q9BTD1 123 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 AURKAIP1Q9NWT8 199 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-207ENST00000558763 TRAV41A0A0B4J266 112 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 MRPS12O15235 138 aaKnown RBP10.06□□□□□ -0.8
SMAD3-207ENST00000558763 IL4P05112 153 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 FABP1P07148 127 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 CXCL1P09341 107 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 Q56UQ5 140 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 ZNF600Q6ZNG1 722 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 TXN2Q99757 166 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 CTDSP1Q9GZU7 261 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 TMEM14CQ9P0S9 112 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 LINC00527Q9UJ94 153 aa10.06□□□□□ -0.8
SMAD3-207ENST00000558763 K7EN84 100 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 RAB5AP20339 215 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 BLCAPP62952 87 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 SCGB2A2Q13296 93 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 NECAP1Q8NC96 275 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 CLDN34H7C241 214 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 PPIFP30405 207 aaKnown RBP10.05□□□□□ -0.8
SMAD3-207ENST00000558763 OCC1Q8TAD7 63 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 IGF2BP2-AS1Q96M15 143 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 PRDM13Q9H4Q3 707 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 URGCP-MRPS24S4R325 110 aa10.05□□□□□ -0.8
SMAD3-207ENST00000558763 NF1P21359 2839 aa10.04□□□□□ -0.8
SMAD3-207ENST00000558763 M0QZK8 103 aa10.04□□□□□ -0.8
SMAD3-207ENST00000558763 NBEAP1P0C6P0 100 aa10.04□□□□□ -0.8
SMAD3-207ENST00000558763 OR5R1Q8NH85 324 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms