RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ACTL10Q5JWF8 245 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 LGALS9CQ6DKI2 356 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 OR8G2PQ6IF36 304 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 SIGLEC15Q6ZMC9 328 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 LGI3Q8N145 548 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 Q8NAQ8 132 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 DTD1Q8TEA8 209 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 C2CD4CQ8TF44 421 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 SLC35E1Q96K37 410 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 C1QTNF4Q9BXJ3 329 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 HRH4Q9H3N8 390 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 NRN1Q9NPD7 142 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 HSPB7Q9UBY9 170 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 U3KQ87 197 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
TRAF3-205ENST00000558700 IGHV4-28A0A0C4DH34 117 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 DUXBA0A1W2PPF3 345 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 ZFP92A6NM28 416 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 C11orf94C9JXX5 98 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 FAM90A26D6RGX4 464 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 H3BMQ9 156 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 DEFB4AO15263 64 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 RD3LP0DJH9 198 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 AKR1C4P17516 323 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 ATP5IP56385 69 aaPredicted RBP5.86□□□□□ -1.47
TRAF3-205ENST00000558700 NUTF2P61970 127 aaKnown RBP5.86□□□□□ -1.47
TRAF3-205ENST00000558700 OR51G1Q8NGK1 321 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 OR1S1Q8NH92 325 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 MCFD2Q8NI22 146 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 TMEM170AQ8WVE7 144 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 PBDC1Q9BVG4 233 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 SLIRPQ9GZT3 109 aaKnown RBP5.86□□□□□ -1.47
TRAF3-205ENST00000558700 RBKSQ9H477 322 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 TBC1D24Q9ULP9 559 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 AGRNO00468 2067 aa5.86□□□□□ -1.47
TRAF3-205ENST00000558700 FABP12A6NFH5 140 aa5.85□□□□□ -1.47
TRAF3-205ENST00000558700 ZNF705EA8MWA4 302 aaPredicted RBP5.85□□□□□ -1.47
TRAF3-205ENST00000558700 GIG44P09565 113 aaPredicted RBP5.85□□□□□ -1.47
TRAF3-205ENST00000558700 PSG1P11464 419 aa5.85□□□□□ -1.47
TRAF3-205ENST00000558700 SUPT4H1P63272 117 aaKnown RBP5.85□□□□□ -1.47
TRAF3-205ENST00000558700 KLF9Q13886 244 aaPredicted RBP5.85□□□□□ -1.47
TRAF3-205ENST00000558700 LYZL2Q7Z4W2 148 aa5.85□□□□□ -1.47
TRAF3-205ENST00000558700 TMED4Q7Z7H5 227 aa5.85□□□□□ -1.47
TRAF3-205ENST00000558700 RPP25LQ8N5L8 163 aaKnown RBP5.85□□□□□ -1.47
TRAF3-205ENST00000558700 DEDD2Q8WXF8 326 aa5.85□□□□□ -1.47
TRAF3-205ENST00000558700 CTDSP1Q9GZU7 261 aa5.85□□□□□ -1.47
TRAF3-205ENST00000558700 TRAV10A0A0B4J240 114 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 BUB3O43684 328 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 MED6O75586 246 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 DEDDO75618 318 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 HLA-DRB4P13762 266 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 HLA-DMBP28068 263 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 TNFSF8P32971 234 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 RAB11AP62491 216 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 TMEM128Q5BJH2 165 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 TOMM5Q8N4H5 51 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 COQ8AQ8NI60 647 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 CIB3Q96Q77 187 aaPredicted RBP5.84□□□□□ -1.47
TRAF3-205ENST00000558700 RAB40CQ96S21 281 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 HLA-DRB4X5D2U9 266 aa5.84□□□□□ -1.47
TRAF3-205ENST00000558700 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 IGLL5B9A064 214 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 RBMY1A1P0DJD3 496 aaKnown RBP5.83□□□□□ -1.48
TRAF3-205ENST00000558700 RBMY1CP0DJD4 496 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 SLC25A6P12236 298 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 S100A5P33763 92 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 GPX4P36969 197 aaPredicted RBP5.83□□□□□ -1.48
TRAF3-205ENST00000558700 ID1P41134 155 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 NKX2-1P43699 371 aaPredicted RBP5.83□□□□□ -1.48
TRAF3-205ENST00000558700 PSMB3P49720 205 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 LYZP61626 148 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 GAMTQ14353 236 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 RBMY1FQ15415 496 aaKnown RBP5.83□□□□□ -1.48
TRAF3-205ENST00000558700 PYDC2Q56P42 97 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 C1orf194Q5T5A4 169 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 SAMD13Q5VXD3 122 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 LRTM2Q8N967 370 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 CSNK1G2-AS1Q8NCQ2 148 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 PPP1R14BQ96C90 147 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 SOSTQ9BQB4 213 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 SLC25A21Q9BQT8 299 aaPredicted RBP5.83□□□□□ -1.48
TRAF3-205ENST00000558700 CLEC5AQ9NY25 188 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 PAIP2BQ9ULR5 123 aaKnown RBP5.83□□□□□ -1.48
TRAF3-205ENST00000558700 V9GYH0 126 aa5.83□□□□□ -1.48
TRAF3-205ENST00000558700 TEX48A0A1B0GUV7 120 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 CCDC160A6NGH7 325 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 H3BMM0 161 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 PITX3O75364 302 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 AMBPP02760 352 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 IAPPP10997 89 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 MEOX2P50222 304 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 ZNF90Q03938 601 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 FOXI2Q6ZQN5 318 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 Q6ZTC4 211 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 TRGV9Q99603 122 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 RNF126Q9BV68 326 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 XCL2Q9UBD3 114 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 APLNQ9ULZ1 77 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 TMED3Q9Y3Q3 217 aa5.82□□□□□ -1.48
TRAF3-205ENST00000558700 IGHV4-4A0A075B6R2 117 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms