RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 BTF3P20290 206 aaKnown RBP12.5□□□□□ -0.41
AP4E1-202ENST00000558439 KLRD1Q13241 179 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 TWIST1Q15672 202 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 UNQ5815/PRO19632Q6UWF5 114 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 YPEL4Q96NS1 127 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 IGHV1-3A0A0C4DH29 117 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 S100A4P26447 101 aaKnown RBP12.5□□□□□ -0.41
AP4E1-202ENST00000558439 MORN5Q5VZ52 161 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 ERASQ7Z444 233 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 C1RLQ9NZP8 487 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 CEACAM8P31997 349 aaPredicted RBP12.5□□□□□ -0.41
AP4E1-202ENST00000558439 Q6ZWC4 215 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 IGFBPL1Q8WX77 278 aa12.5□□□□□ -0.41
AP4E1-202ENST00000558439 GPX1P07203 203 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 IGFL2Q6UWQ7 119 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 OR5AN1Q8NGI8 311 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 IGKV1OR2-108A0A075B7D4 117 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 ZNF207O43670 478 aaKnown RBP12.49□□□□□ -0.41
AP4E1-202ENST00000558439 PRSS1P07477 247 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 ZNF672Q499Z4 452 aaPredicted RBP12.49□□□□□ -0.41
AP4E1-202ENST00000558439 FAM168AQ92567 244 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 TMEM70Q9BUB7 260 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 SIGLEC9Q9Y336 463 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 TSKUQ8WUA8 353 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 DDB2Q92466 427 aa12.49□□□□□ -0.41
AP4E1-202ENST00000558439 C3orf79P0CE67 100 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 ZNF138P52744 262 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 RPL15P61313 204 aaKnown RBP12.48□□□□□ -0.41
AP4E1-202ENST00000558439 HSPB8Q9UJY1 196 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 ANKRD11Q6UB99 2663 aaPredicted RBP12.48□□□□□ -0.41
AP4E1-202ENST00000558439 TMPRSS3P57727 454 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 RELQ04864 619 aaPredicted RBP12.48□□□□□ -0.41
AP4E1-202ENST00000558439 OR4C46A6NHA9 309 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 LOXP28300 417 aaPredicted RBP12.48□□□□□ -0.41
AP4E1-202ENST00000558439 RBPMS2Q6ZRY4 209 aaKnown RBP12.48□□□□□ -0.41
AP4E1-202ENST00000558439 LURAP1LQ8IV03 231 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 MCRIP2Q9BUT9 160 aaKnown RBP12.48□□□□□ -0.41
AP4E1-202ENST00000558439 LY96Q9Y6Y9 160 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 HLA-DRB1P01911 266 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 COMPP49747 757 aaPredicted RBP12.48□□□□□ -0.41
AP4E1-202ENST00000558439 YPEL3P61236 119 aaPredicted RBP12.48□□□□□ -0.41
AP4E1-202ENST00000558439 IGFL3Q6UXB1 125 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 ZNF833PQ6ZTB9 187 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 ZNF329Q86UD4 541 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 NIT1Q86X76 327 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 FBXL7Q9UJT9 491 aa12.48□□□□□ -0.41
AP4E1-202ENST00000558439 TNRC6AQ8NDV7 1962 aaKnown RBP12.47□□□□□ -0.41
AP4E1-202ENST00000558439 A0A1B0GUT8 65 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 OR2T8A6NH00 312 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 E7EUB6 86 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 CKS2P33552 79 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 C8orf46Q8TAG6 207 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 FMC1Q96HJ9 113 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 SLC25A2Q9BXI2 301 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 SNHG12Q9BXW3 62 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 SPTBN5Q9NRC6 3674 aaKnown RBP12.47□□□□□ -0.41
AP4E1-202ENST00000558439 CSPG4Q6UVK1 2322 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 COL4A2P08572 1712 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 M0R3E3 92 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 NBR2O15453 112 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 TMEM136Q6ZRR5 245 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 RNF125Q96EQ8 232 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 AP5S1Q9NUS5 200 aa12.47□□□□□ -0.41
AP4E1-202ENST00000558439 GOSR1O95249 250 aa12.46□□□□□ -0.41
AP4E1-202ENST00000558439 TCRAP04437 139 aa12.46□□□□□ -0.41
AP4E1-202ENST00000558439 OR10J3Q5JRS4 329 aa12.46□□□□□ -0.41
AP4E1-202ENST00000558439 WFDC3Q8IUB2 231 aa12.46□□□□□ -0.41
AP4E1-202ENST00000558439 CTSZQ9UBR2 303 aa12.46□□□□□ -0.41
AP4E1-202ENST00000558439 APOHP02749 345 aaPredicted RBP12.46□□□□□ -0.41
AP4E1-202ENST00000558439 SLC25A39Q9BZJ4 359 aaPredicted RBP12.46□□□□□ -0.41
AP4E1-202ENST00000558439 CHODLQ9H9P2 273 aa12.46□□□□□ -0.41
AP4E1-202ENST00000558439 C21orf62Q9NYP8 219 aa12.46□□□□□ -0.41
AP4E1-202ENST00000558439 DYSFO75923 2080 aa12.46□□□□□ -0.42
AP4E1-202ENST00000558439 A0A1W2PS18 150 aa12.46□□□□□ -0.42
AP4E1-202ENST00000558439 SLAQ13239 276 aa12.46□□□□□ -0.42
AP4E1-202ENST00000558439 DMRTA1Q5VZB9 504 aa12.46□□□□□ -0.42
AP4E1-202ENST00000558439 BEND2Q8NDZ0 799 aa12.46□□□□□ -0.42
AP4E1-202ENST00000558439 SH2D7A6NKC9 451 aaPredicted RBP12.45□□□□□ -0.42
AP4E1-202ENST00000558439 FNDC10F2Z333 226 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 C21orf62-AS1Q17RA5 79 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 TDRG1Q3Y452 100 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 TEX36Q5VZQ5 186 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 RITA1Q96K30 269 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 RCHY1Q96PM5 261 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 LOC102724200A0A096LPH7 203 aaPredicted RBP12.45□□□□□ -0.42
AP4E1-202ENST00000558439 BUB1B-PAK6H3BSN5 160 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 GPR183P32249 361 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 NUTF2P61970 127 aaKnown RBP12.45□□□□□ -0.42
AP4E1-202ENST00000558439 TMEM155Q4W5P6 130 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 C11orf52Q96A22 123 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 UQCRFS1P47985 274 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 EIF4EBP1Q13541 118 aaPredicted RBP12.45□□□□□ -0.42
AP4E1-202ENST00000558439 POU2AF1Q16633 256 aa12.45□□□□□ -0.42
AP4E1-202ENST00000558439 FAM106CPP0CH98 169 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 RPL7P18124 248 aaKnown RBP12.44□□□□□ -0.42
AP4E1-202ENST00000558439 VPS25Q9BRG1 176 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 OTORQ9NRC9 128 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 LAMTOR2Q9Y2Q5 125 aa12.44□□□□□ -0.42
AP4E1-202ENST00000558439 FRYLO94915 3013 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms