RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 OR5I1Q13606 314 aa12.38□□□□□ -0.43
TSPAN3-204ENST00000558394 AMTNQ6UX39 209 aa12.38□□□□□ -0.43
TSPAN3-204ENST00000558394 ARRDC1Q8N5I2 433 aa12.38□□□□□ -0.43
TSPAN3-204ENST00000558394 UHRF2Q96PU4 802 aa12.38□□□□□ -0.43
TSPAN3-204ENST00000558394 CACFD1Q9UGQ2 172 aa12.38□□□□□ -0.43
TSPAN3-204ENST00000558394 GABARAPH6UMI1 98 aa12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 GABARAPO95166 117 aa12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 ZNF182P17025 639 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 CNN1P51911 297 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 OR11H7Q8NGC8 314 aa12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 TMEM170AQ8WVE7 144 aa12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 LINC01587Q99440 93 aa12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 ZNF586Q9NXT0 402 aa12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-204ENST00000558394 A8MTW9 85 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 TNFAIP8O95379 198 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 HTN1P15515 57 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 AZU1P20160 251 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 ZNF90Q03938 601 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 LHFPL1Q86WI0 220 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 BAP18Q8IXM2 172 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 OR10J6PQ8NGY7 276 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 RBPMSQ93062 196 aaKnown RBP12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 SLC35E1Q96K37 410 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 UPK3BQ9BT76 320 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 PPP1R14DQ9NXH3 145 aa12.36□□□□□ -0.43
TSPAN3-204ENST00000558394 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 CRXO43186 299 aaPredicted RBP12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 CDS2O95674 445 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 TGFBR1P36897 503 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 RPS19P39019 145 aaKnown RBP12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 NMSQ5H8A3 153 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 CDPF1Q6NVV7 123 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 TMEM256Q8N2U0 113 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 C16orf74Q96GX8 76 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 TMEM222Q9H0R3 208 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 COMMD3Q9UBI1 195 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 U3KQ87 197 aa12.35□□□□□ -0.43
TSPAN3-204ENST00000558394 TEX13DA0A0J9YY54 714 aaPredicted RBP12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 PLAC8L1A1L4L8 177 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 ADAP1O75689 374 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 IFNA5P01569 189 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 APOA1P02647 267 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 OR5AC1P0C628 307 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 ELK1P19419 428 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 M6PRP20645 277 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 XGP55808 180 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 OR2F1Q13607 317 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 SCGB2B2Q4G0G5 96 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 RNASE12Q5GAN4 147 aaKnown RBP12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 OR13C8Q8NGS7 320 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 RXFP4Q8TDU9 374 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 ZNF503Q96F45 646 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 SLC25A22Q9H936 323 aa12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 FLG2Q5D862 2391 aaPredicted RBP12.34□□□□□ -0.43
TSPAN3-204ENST00000558394 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 A0A0J9YY99 117 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 J3QL48 77 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 LINC00315P59091 139 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 TAS2R60P59551 318 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 TMEM144Q7Z5S9 345 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 LGI3Q8N145 548 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 TERB2Q8NHR7 220 aa12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 NOP10Q9NPE3 64 aaKnown RBP12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 C14orf166Q9Y224 244 aaKnown RBP12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 MRPS16Q9Y3D3 137 aaKnown RBP12.33□□□□□ -0.44
TSPAN3-204ENST00000558394 BOLA2-SMG1P6H3BVE0 249 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 CD3DP04234 171 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 TBPP20226 339 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 S100A7P31151 101 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 GPX4P36969 197 aaPredicted RBP12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 RHOBP62745 196 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 GAMTQ14353 236 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 MEF2DQ14814 521 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 ESRGQ1W209 222 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 TMEM268Q5VZI3 342 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 SELENOHQ8IZQ5 122 aaKnown RBP12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 MARCH1Q8TCQ1 289 aa12.32□□□□□ -0.44
TSPAN3-204ENST00000558394 FAT1Q14517 4588 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 FAM229AH3BQW9 127 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 SULT1A3P0DMM9 295 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 SULT1A4P0DMN0 295 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 FUSP35637 526 aaKnown RBP eCLIP12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 FGL1Q08830 312 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 ZNF493Q6ZR52 646 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 ZNF738Q8NE65 137 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 LHFPL5Q8TAF8 219 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 GLYATL2Q8WU03 294 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 SLC25A39Q9BZJ4 359 aaPredicted RBP12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 SLC25A32Q9H2D1 315 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 VCX3AQ9NNX9 186 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 MYCBP2O75592 4640 aa12.31□□□□□ -0.44
TSPAN3-204ENST00000558394 IGKV1D-37A0A075B6S9 117 aa12.3□□□□□ -0.44
TSPAN3-204ENST00000558394 CFDP00746 253 aaPredicted RBP12.3□□□□□ -0.44
TSPAN3-204ENST00000558394 LSM3P62310 102 aaKnown RBP12.3□□□□□ -0.44
TSPAN3-204ENST00000558394 OR1B1Q8NGR6 318 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms