RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 IMUPQ9GZP8 106 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 PARVBQ9HBI1 364 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 C19orf12Q9NSK7 152 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 MRPL16Q9NX20 251 aaKnown RBP0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZNF443Q9Y2A4 671 aaPredicted RBP0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 V9GYQ6 96 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 IGHV3-64A0A075B6Q5 118 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 IGKV1OR2-108A0A075B7D4 117 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 A6NED7 52 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 GGCTO75223 188 aaKnown RBP0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 SMIM24O75264 130 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 IGKV1D-33P01593 117 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 IGKV1-33P01594 117 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 SERPINA7P05543 415 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 PPP1R2P41236 205 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 AKR1D1P51857 326 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 TCTAP57738 103 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 KRTAP10-8P60410 259 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 SNRPD2P62316 118 aaKnown RBP0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 RUNX1Q01196 453 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 TSNQ15631 228 aaKnown RBP0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 FAM201AQ5SY85 155 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 PPP1R2P3Q6NXS1 205 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 EBLN2Q6P2I7 272 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 TMEM136Q6ZRR5 245 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZNF561Q8N587 486 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 CNEP1R1Q8N9A8 125 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 TOMM6Q96B49 74 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 FXYD5Q96DB9 178 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 MALSU1Q96EH3 234 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 TEX37Q96LM6 180 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 TSPAN32Q96QS1 320 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 TMEM109Q9BVC6 243 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 ASB4Q9Y574 426 aa0.77□□□□□ -2.29
CTDSPL2-202ENST00000558373 A0A087WUU8 490 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 TRAV38-1A0A0B4J264 116 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 A0A1W2PQL4 384 aaPredicted RBP0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 NDUFC2O95298 119 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HAND1O96004 215 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 TTRP02766 147 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 SMIM6P0DI80 62 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 CD28P10747 220 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 COX6A1P12074 109 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZNF7P17097 686 aaPredicted RBP0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 S100A4P26447 101 aaKnown RBP0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 FXYD2P54710 66 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 TPI1P60174 286 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 PPP1R1AQ13522 171 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 CDK10Q15131 360 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ACOT6Q3I5F7 207 aaPredicted RBP0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 DEFB128Q7Z7B8 93 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR1L8Q8NGR8 309 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 DYDC1Q8WWB3 177 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 SFRP2Q96HF1 295 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 SERPINI1Q99574 410 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 SH3BGRL3Q9H299 93 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 LRTM1Q9HBL6 345 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 C8orf4Q9NR00 106 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 EDC4Q6P2E9 1401 aaKnown RBP0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 LCTP09848 1927 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 TRGV5A0A0B4J1U4 118 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 GGT3PA6NGU5 568 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ATP6V1G2-DDX39BF2Z307 99 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 BHLHE40O14503 412 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 TECPR2O15040 1411 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 PDE6DO43924 150 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ATG12O94817 140 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 TCL1BO95988 128 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 SULT1A3P0DMM9 295 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 SULT1A4P0DMN0 295 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ESDP10768 282 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 SCGB1A1P11684 91 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 CXCL2P19875 107 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST1H2BOP23527 126 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 KDELR1P24390 212 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 SRIP30626 198 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST1H2BBP33778 126 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 FUSP35637 526 aaKnown RBP eCLIP0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 PPP1CCP36873 323 aaKnown RBP0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 TCL1AP56279 114 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST1H2BDP58876 126 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST1H2BCP62807 126 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 MYL5Q02045 173 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZNF90Q03938 601 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 RSU1Q15404 277 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST2H2BEQ16778 126 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 C4orf26Q17RF5 130 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 Q5XG85 94 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ATP5L2Q7Z4Y8 100 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ANKRD29Q8N6D5 301 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 ZNF676Q8N7Q3 588 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 CLDND2Q8NHS1 167 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST1H2BHQ93079 126 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST1H2BNQ99877 126 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 HIST1H2BMQ99879 126 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 PECRQ9BY49 303 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 EFCAB1Q9HAE3 211 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 BIN3Q9NQY0 253 aa0.76□□□□□ -2.29
CTDSPL2-202ENST00000558373 OR5V1Q9UGF6 321 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms