RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TMEM158Q8WZ71 300 aa11.51□□□□□ -0.57
SPG11-210ENST00000558319 MPDZO75970 2070 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 MPZP25189 248 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 CABIN1Q9Y6J0 2220 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 TRGV1A0A0A0MS02 117 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 GFI1Q99684 422 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
SPG11-210ENST00000558319 ZNF876PQ49A33 203 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 PRSS57Q6UWY2 283 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 GGTLC1Q9BX51 225 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 F2Z2F3 143 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 HAPLN4Q86UW8 402 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
SPG11-210ENST00000558319 APC2O95996 2303 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 LTBP4Q8N2S1 1624 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 RUSC1-AS1Q66K80 236 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 C1QTNF5Q9BXJ0 243 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 ZNF497Q6ZNH5 498 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 FCN3O75636 299 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 TCF15Q12870 199 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 TREML4Q6UXN2 200 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 SLC50A1Q9BRV3 221 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 RNASE6Q93091 150 aaKnown RBP11.49□□□□□ -0.57
SPG11-210ENST00000558319 SPXQ9BT56 116 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 IGKV1-9A0A0C4DH69 117 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 Q8TAT8 98 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 ZNRD1Q9P1U0 126 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 SMPXQ9UHP9 88 aa11.49□□□□□ -0.57
SPG11-210ENST00000558319 PVRIGQ6DKI7 326 aa11.48□□□□□ -0.57
SPG11-210ENST00000558319 SUMO4Q6EEV6 95 aa11.48□□□□□ -0.57
SPG11-210ENST00000558319 PAQR4Q8N4S7 273 aaPredicted RBP11.48□□□□□ -0.57
SPG11-210ENST00000558319 MBNL3Q9NUK0 354 aaKnown RBP11.48□□□□□ -0.57
SPG11-210ENST00000558319 DEFB130BP0DP73 79 aa11.48□□□□□ -0.57
SPG11-210ENST00000558319 DEFB130AP0DP74 79 aa11.48□□□□□ -0.57
SPG11-210ENST00000558319 MARF1Q9Y4F3 1742 aaKnown RBP11.48□□□□□ -0.57
SPG11-210ENST00000558319 PRB1P04280 392 aa11.48□□□□□ -0.57
SPG11-210ENST00000558319 ID3Q02535 119 aa11.48□□□□□ -0.57
SPG11-210ENST00000558319 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
SPG11-210ENST00000558319 CSTL1Q9H114 145 aa11.48□□□□□ -0.57
SPG11-210ENST00000558319 SH2D1AO60880 128 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 RPRMLQ8N4K4 120 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 KLHL30-AS1Q8NEE0 82 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 RCHY1Q96PM5 261 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 CD5LO43866 347 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 PAX8Q06710 450 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 AGMATQ9BSE5 352 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 VWCEQ96DN2 955 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 TMEM133Q9H2Q1 129 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 A0A096LPF7 62 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 IGHV3-16A0A0C4DH30 117 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 A8MWP6 167 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 LINC00312Q9Y6C7 94 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 CACNA1IQ9P0X4 2223 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
SPG11-210ENST00000558319 IGHV1-46P01743 117 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 NABP1Q96AH0 204 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 PRR30Q53SZ7 412 aaPredicted RBP11.46□□□□□ -0.57
SPG11-210ENST00000558319 SNHG12Q9BXW3 62 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 H3BMM0 161 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 H3BUX3 64 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 YPEL1O60688 119 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 ADCYAP1P18509 176 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 UBE2WQ96B02 151 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 PLEKHB2Q96CS7 222 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 YPEL2Q96QA6 119 aa11.46□□□□□ -0.57
SPG11-210ENST00000558319 A0A087WWL8 130 aa11.46□□□□□ -0.58
SPG11-210ENST00000558319 AMN1Q8IY45 258 aa11.46□□□□□ -0.58
SPG11-210ENST00000558319 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.58
SPG11-210ENST00000558319 LEPROTO15243 131 aa11.46□□□□□ -0.58
SPG11-210ENST00000558319 IQCF6A8MYZ5 107 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 PRCDQ00LT1 54 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 GAGE1Q13065 139 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
SPG11-210ENST00000558319 WDR83OSQ9Y284 106 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 ZNF672Q499Z4 452 aaPredicted RBP11.45□□□□□ -0.58
SPG11-210ENST00000558319 C14orf178Q8N769 122 aaPredicted RBP11.45□□□□□ -0.58
SPG11-210ENST00000558319 PLXNA1Q9UIW2 1896 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 LILRA1O75019 489 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 WNT2P09544 360 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 C15orf32Q32M92 178 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 DUTP33316 252 aaKnown RBP11.45□□□□□ -0.58
SPG11-210ENST00000558319 GATA4P43694 442 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
SPG11-210ENST00000558319 RNF223E7ERA6 249 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 SLC25A48Q6ZT89 311 aaKnown RBP11.45□□□□□ -0.58
SPG11-210ENST00000558319 WBP1Q96G27 269 aa11.45□□□□□ -0.58
SPG11-210ENST00000558319 TRAV13-1A0A0B4J241 112 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 KNCNA6PVL3 124 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 RS1O15537 224 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 ERCC8Q13216 396 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 TMEM200BQ69YZ2 307 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 A0A087WX48 190 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 TRGV11A0A075B6L2 103 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 C3orf56Q8N813 242 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 SCN4AP35499 1836 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 YLPM1P49750 1951 aaKnown RBP11.44□□□□□ -0.58
SPG11-210ENST00000558319 TRAV41A0A0B4J266 112 aa11.44□□□□□ -0.58
SPG11-210ENST00000558319 RPL32P62910 135 aaKnown RBP11.44□□□□□ -0.58
SPG11-210ENST00000558319 SUPT4H1P63272 117 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms