RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ORM2P19652 201 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 PSMB3P49720 205 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 RPP30P78346 268 aaKnown RBP11.16□□□□□ -0.62
TPM1-211ENST00000558314 AKR1C1Q04828 323 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 SPANXN5Q5MJ07 72 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 FOXI2Q6ZQN5 318 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 TRGV9Q99603 122 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 SOSTQ9BQB4 213 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 NDUFAF3Q9BU61 184 aa11.16□□□□□ -0.62
TPM1-211ENST00000558314 PIGBOS1A0A0B4J2F0 54 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 DUXBA0A1W2PPF3 345 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 SFT2D2O95562 160 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 GATA2P23769 480 aaPredicted RBP11.15□□□□□ -0.62
TPM1-211ENST00000558314 S100A5P33763 92 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 FGL1Q08830 312 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 PPP1R1AQ13522 171 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 C1orf194Q5T5A4 169 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 FAM78BQ5VT40 261 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 TRIM63Q969Q1 353 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 RSG1Q9BU20 258 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 PLA2G2EQ9NZK7 142 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 RFNGQ9Y644 331 aa11.15□□□□□ -0.62
TPM1-211ENST00000558314 DNAH10Q8IVF4 4471 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 IGKV1OR2-108A0A075B7D4 117 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 SYNGR2O43760 224 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 PITX3O75364 302 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 GALR1P47211 349 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 INPP1P49441 399 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 PSG9Q00887 426 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 GGNBP1Q5YKI7 109 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 UBE2DNLQ8IWF7 75 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 OR1B1Q8NGR6 318 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 CIB3Q96Q77 187 aaPredicted RBP11.14□□□□□ -0.63
TPM1-211ENST00000558314 TMEM208Q9BTX3 173 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 SLC25A32Q9H2D1 315 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 DOK5Q9P104 306 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 GOLT1BQ9Y3E0 138 aa11.14□□□□□ -0.63
TPM1-211ENST00000558314 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 ZNF701M0R085 212 aaPredicted RBP11.13□□□□□ -0.63
TPM1-211ENST00000558314 ISLRO14498 428 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 SOCS3O14543 225 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 AMBPP02760 352 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 FAM222AQ5U5X8 452 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 ZNF705AQ6ZN79 300 aaPredicted RBP11.13□□□□□ -0.63
TPM1-211ENST00000558314 THAP8Q8NA92 274 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 BPIFCQ8NFQ6 507 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 C20orf173Q96LM9 149 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 SLC25A21Q9BQT8 299 aaPredicted RBP11.13□□□□□ -0.63
TPM1-211ENST00000558314 TMEM147Q9BVK8 224 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 RPRMQ9NS64 109 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 NDUFA13Q9P0J0 144 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 TMED3Q9Y3Q3 217 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 V9GYH0 126 aa11.13□□□□□ -0.63
TPM1-211ENST00000558314 TMEM189A5PLL7 270 aa11.12□□□□□ -0.63
TPM1-211ENST00000558314 ZNF705FA8MVS1 300 aaPredicted RBP11.12□□□□□ -0.63
TPM1-211ENST00000558314 HBE1P02100 147 aa11.12□□□□□ -0.63
TPM1-211ENST00000558314 ZNF705DP0CH99 300 aaPredicted RBP11.12□□□□□ -0.63
TPM1-211ENST00000558314 ZNF705BP0CI00 300 aaPredicted RBP11.12□□□□□ -0.63
TPM1-211ENST00000558314 P0DMU3 169 aa11.12□□□□□ -0.63
TPM1-211ENST00000558314 FAM231AP0DMU4 169 aa11.12□□□□□ -0.63
TPM1-211ENST00000558314 FAM231CP0DMU5 169 aa11.12□□□□□ -0.63
TPM1-211ENST00000558314 ZNF709Q8N972 641 aa11.12□□□□□ -0.63
TPM1-211ENST00000558314 NEU1Q99519 415 aa11.12□□□□□ -0.63
TPM1-211ENST00000558314 STRAPQ9Y3F4 350 aaKnown RBP11.12□□□□□ -0.63
TPM1-211ENST00000558314 A0A0J9YX75 114 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 LOC102723971A0A1B0GUV8 181 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 SMIM9A6NGZ8 99 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 ZNF98A6NK75 572 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 ADAP1O75689 374 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 IFNA21P01568 189 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 SLC25A6P12236 298 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 ZNF79Q15937 498 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 TMEM182Q6ZP80 229 aaPredicted RBP11.11□□□□□ -0.63
TPM1-211ENST00000558314 ACOT7LQ6ZUV0 252 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 POM121L12Q8N7R1 296 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 LRTM2Q8N967 370 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 NIPSNAP3BQ9BS92 247 aa11.11□□□□□ -0.63
TPM1-211ENST00000558314 VPS13DQ5THJ4 4388 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 SCGB1D2O95969 90 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 CFDP00746 253 aaPredicted RBP11.1□□□□□ -0.63
TPM1-211ENST00000558314 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
TPM1-211ENST00000558314 MEOX2P50222 304 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 POLR2GP62487 172 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM1-211ENST00000558314 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 SPATA31B1PQ5VZV4 182 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 RNF182Q8N6D2 247 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 PSENENQ9NZ42 101 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
TPM1-211ENST00000558314 YTHDF2Q9Y5A9 579 aaKnown RBP11.1□□□□□ -0.63
TPM1-211ENST00000558314 SSSCA1O60232 199 aa11.09□□□□□ -0.63
TPM1-211ENST00000558314 IL5P05113 134 aa11.09□□□□□ -0.63
TPM1-211ENST00000558314 RRAS2P62070 204 aaPredicted RBP11.09□□□□□ -0.63
TPM1-211ENST00000558314 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
TPM1-211ENST00000558314 TRIQKQ629K1 86 aa11.09□□□□□ -0.63
TPM1-211ENST00000558314 FLVCR2Q9UPI3 526 aa11.09□□□□□ -0.63
TPM1-211ENST00000558314 TEX48A0A1B0GUV7 120 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms