RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 CLEC7AQ9BXN2 247 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 RAB9BQ9NP90 201 aa6.49□□□□□ -1.37
RTF1-205ENST00000558298 YTHDF2Q9Y5A9 579 aaKnown RBP6.49□□□□□ -1.37
RTF1-205ENST00000558298 IGKV1-27A0A075B6S5 117 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 IGKV1D-13A0A0B4J2D9 117 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 IGKV1-12A0A0C4DH73 117 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 A0A1B0GW15 77 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 A0A1W2PRE2 83 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 C7orf71A4D174 169 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 TMEM189A5PLL7 270 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 OR4C46A6NHA9 309 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 K7EP34 96 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 M0QZ24 198 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 BMPR1BO00238 502 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 IGKV1D-12P01611 117 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 GRPP07492 148 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 SCTP09683 121 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 P0C879 139 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 IGKV1-13P0DP09 117 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 IGLL1P15814 213 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 EGR1P18146 543 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 NPPCP23582 126 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 GCHFRP30047 84 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 GPR183P32249 361 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 PSG9Q00887 426 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 LINC01559Q495D7 138 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 IBA57Q5T440 356 aaKnown RBP6.48□□□□□ -1.37
RTF1-205ENST00000558298 AMMECR1LQ6DCA0 310 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 H2BFWTQ7Z2G1 175 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 NEGR1Q7Z3B1 354 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 OR8I2Q8N0Y5 310 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 NHLRC2Q8NBF2 726 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 OR4A16Q8NH70 328 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 C18orf32Q8TCD1 76 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 C5orf30Q96GV9 206 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 ATP6V0BQ99437 205 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 FAM234AQ9H0X4 552 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 OR2D2Q9H210 308 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 NPVFQ9HCQ7 196 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 YAE1D1Q9NRH1 226 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 MTCH1Q9NZJ7 389 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 CTSZQ9UBR2 303 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 RABAC1Q9UI14 185 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 INSIG2Q9Y5U4 225 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 ARHGAP32A7KAX9 2087 aa6.48□□□□□ -1.37
RTF1-205ENST00000558298 COL6A5A8TX70 2615 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 TRAV34A0A0B4J273 112 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 PSMB11A5LHX3 300 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 PMS2P5A8MQ11 134 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 C22orf46C9J442 243 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 ENSAO43768 121 aaKnown RBP6.47□□□□□ -1.37
RTF1-205ENST00000558298 TGFAP01135 160 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 ARL14EPLP0DKL9 152 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 NTF3P20783 257 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 GPR12P47775 334 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 ATP5G3P48201 142 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 PAX8Q06710 450 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 HSD52Q0P140 79 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 ZNF146Q15072 292 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 MPV17L2Q567V2 206 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 UFSP1Q6NVU6 142 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 ACP7Q6ZNF0 438 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 LCNL1Q6ZST4 164 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 ZNF826PQ6ZT77 177 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 KIR3DL3Q8N743 410 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 LY6G5BQ8NDX9 201 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 DEFB108BQ8NET1 73 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 OR10AG1Q8NH19 301 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 VSTM2AQ8TAG5 236 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 ZNF48Q96MX3 618 aaPredicted RBP6.47□□□□□ -1.37
RTF1-205ENST00000558298 MRPL32Q9BYC8 188 aaKnown RBP6.47□□□□□ -1.37
RTF1-205ENST00000558298 TNFRSF19Q9NS68 423 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 HIF1ANQ9NWT6 349 aa6.47□□□□□ -1.37
RTF1-205ENST00000558298 TECRQ9NZ01 308 aaKnown RBP6.47□□□□□ -1.37
RTF1-205ENST00000558298 TRBV20OR9-2A0A075B6H5 130 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 IGKV1D-17A0A075B6S4 117 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 A0A0G2JRQ6 117 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 SCO2A0A1W2PP80 73 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 C2orf70A6NJV1 201 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 SYS1-DBNDD2H3BUS1 97 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 SH2D1BO14796 132 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 LEPROTL1O95214 131 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 IGKV1-39P01597 117 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 IGKV1D-39P04432 117 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 COX8AP10176 69 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 FABP2P12104 132 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 ZFP36P26651 326 aaKnown RBP6.46□□□□□ -1.38
RTF1-205ENST00000558298 HTR1DP28221 377 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 PLP1P60201 277 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 CR1LQ2VPA4 569 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 Q56UQ5 140 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 TMEM97Q5BJF2 176 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 FAM201AQ5SY85 155 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 FAM120AOSQ5T036 256 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 CFAP161Q6P656 301 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 TEPPQ6URK8 271 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 Q6ZRM9 215 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 C1orf122Q6ZSJ8 110 aa6.46□□□□□ -1.38
RTF1-205ENST00000558298 C9orf139Q6ZV77 190 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms