RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 TMEM42Q69YG0 159 aa9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 C1orf162Q8NEQ5 155 aaPredicted RBP9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 PRO1854Q9UHT4 67 aa9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 ANAPC10Q9UM13 185 aa9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 MRPS18CQ9Y3D5 142 aaKnown RBP9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 CHD5Q8TDI0 1954 aa9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 ZNF318Q5VUA4 2279 aa9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 SMIM27A0A1W2PRY6 76 aa9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 EFEMP2O95967 443 aa9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 RPP25Q9BUL9 199 aaKnown RBP9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 V9GYV3 84 aa9.69□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGKV1-12A0A0C4DH73 117 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 TEX48A0A1B0GUV7 120 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGKV1D-12P01611 117 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 CD7P09564 240 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 Q6ZT83 130 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 LINC01565O15544 149 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 NTF4P34130 210 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 ZNF329Q86UD4 541 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGHV3-35A0A0C4DH35 117 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 C15orf62A8K5M9 175 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 ARRDC1-AS1Q9H2J1 176 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 SH2D1AO60880 128 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 AMN1Q8IY45 258 aa9.68□□□□□ -0.86
CSPG4P12-201ENST00000558282 PPIFP30405 207 aaKnown RBP9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 VDAC2P45880 294 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 SIGLEC8Q9NYZ4 499 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 SCN8AQ9UQD0 1980 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGHV3OR16-12A0A075B7B8 117 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 CRYGSP22914 178 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 Q86TA4 180 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 ARID2Q68CP9 1835 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGHV3OR16-13A0A075B7E8 117 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 LOC102723996A0A087X1L8 192 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGHV3-74A0A0B4J1X5 117 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 E9PQ18 207 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 LINC00158P58513 81 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 RPL15P61313 204 aaKnown RBP9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 TCF15Q12870 199 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 FAM104BQ5XKR9 115 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 LAMTOR3Q9UHA4 124 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGHV3-64A0A075B6Q5 118 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 TRGV3P03979 118 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 C12orf74Q32Q52 190 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 MRAPQ8TCY5 172 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 DCTN5Q9BTE1 182 aa9.67□□□□□ -0.86
CSPG4P12-201ENST00000558282 HAX1O00165 279 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 NPYP01303 97 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 FOXF2Q12947 444 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 PSG7Q13046 419 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 PCOLCEQ15113 449 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 CDCP2Q5VXM1 449 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 Q8N8P6 123 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGLV3-32A0A0A0MS00 114 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 FXYD7P58549 80 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 LY6G5BQ8NDX9 201 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 PARP14Q460N5 1801 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 DOCK5Q9H7D0 1870 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 CELA2AP08217 269 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 FGF6P10767 208 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 CRYBA4P53673 196 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 KLF5Q13887 457 aaPredicted RBP9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 VOPP1Q96AW1 172 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 TMEM141Q96I45 108 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 CHCHD2Q9Y6H1 151 aaPredicted RBP9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 KLRD1Q13241 179 aa9.66□□□□□ -0.86
CSPG4P12-201ENST00000558282 PRSS47A8MTI9 375 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 PRSS46E5RG02 174 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 G3V4G9 280 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 COX6A1P12074 109 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 ZNF236Q9UL36 1845 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 NBR2O15453 112 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 SPACA3Q8IXA5 215 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 PRR7Q8TB68 274 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 WIPF2Q8TF74 440 aaPredicted RBP9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 IGKV3D-20A0A0C4DH25 116 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 SRD5A1P18405 259 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 RSPO4Q2I0M5 234 aaPredicted RBP9.65□□□□□ -0.86
CSPG4P12-201ENST00000558282 WDR90Q96KV7 1748 aa9.65□□□□□ -0.87
CSPG4P12-201ENST00000558282 IGLC1P0CG04 106 aa9.65□□□□□ -0.87
CSPG4P12-201ENST00000558282 C8orf86Q6ZUL3 223 aa9.65□□□□□ -0.87
CSPG4P12-201ENST00000558282 SLC22A18ASQ8N1D0 253 aa9.65□□□□□ -0.87
CSPG4P12-201ENST00000558282 EXOC3-AS1Q8N2X6 119 aa9.65□□□□□ -0.87
CSPG4P12-201ENST00000558282 PNRC2Q9NPJ4 139 aaKnown RBP9.65□□□□□ -0.87
CSPG4P12-201ENST00000558282 KLK10O43240 276 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 PAX4O43316 350 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 SAP30O75446 220 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 ARMS2P0C7Q2 107 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 HEATR5BQ9P2D3 2071 aa9.64□□□□□ -0.87
CSPG4P12-201ENST00000558282 COL11A1P12107 1806 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms