RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 AMBPP02760 352 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 IL4P05112 153 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 FABP1P07148 127 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 CCDC144NLQ6NUI1 221 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 TMEM256Q8N2U0 113 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 NRGNQ92686 78 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 FANCD2OSQ96PS1 177 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 HSPB9Q9BQS6 159 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 Q9H3A6 140 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 EPDR1Q9UM22 224 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 LINC00587B1AMM8 73 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 NUPR1O60356 82 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 PIP4P2Q8N4L2 257 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 ZNF586Q9NXT0 402 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 CDC42EP3Q9UKI2 254 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 LY96Q9Y6Y9 160 aa8.32□□□□□ -1.08
TPM1-210ENST00000558264 SNURFLB1AK76 121 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 GNG7O60262 68 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 RAB4BP61018 213 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 UBE2G1P62253 170 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 ECSCRQ19T08 205 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 KIAA1644Q3SXP7 199 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 Q56UQ5 140 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 ZNF562Q6V9R5 426 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 AJUBAQ96IF1 538 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 MRPL18Q9H0U6 180 aaKnown RBP8.31□□□□□ -1.08
TPM1-210ENST00000558264 IGHV7-81A0A0B4J1V7 117 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 OR2T8A6NH00 312 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 NDUFB8O95169 186 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 MYCNOSP40205 109 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 BRD3OSQ6XYD6 125 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 C1orf122Q6ZSJ8 110 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 TMEM219Q86XT9 240 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 Q8N6K4 173 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 BTF3L4Q96K17 158 aa8.31□□□□□ -1.08
TPM1-210ENST00000558264 LINC01548A6NM66 108 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 F2Z2F3 143 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 FCGR2BP31994 310 aaPredicted RBP8.3□□□□□ -1.08
TPM1-210ENST00000558264 USF2Q15853 346 aaPredicted RBP8.3□□□□□ -1.08
TPM1-210ENST00000558264 Q8N9W7 124 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 SOX21Q9Y651 276 aaPredicted RBP8.3□□□□□ -1.08
TPM1-210ENST00000558264 IGLV11-55A0A075B6I3 123 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 IGHV4-61A0A0C4DH41 118 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 OVOL3O00110 214 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 EGR2P11161 476 aaPredicted RBP8.3□□□□□ -1.08
TPM1-210ENST00000558264 MINOS1Q5TGZ0 78 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 STXBP6Q8NFX7 210 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 RNF125Q96EQ8 232 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 CCL19Q99731 98 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 OSTCQ9NRP0 149 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 MINOS1-NBL1R4GNA1 71 aa8.3□□□□□ -1.08
TPM1-210ENST00000558264 USP24Q9UPU5 2620 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 F8W735 103 aaPredicted RBP8.29□□□□□ -1.08
TPM1-210ENST00000558264 UBE2E1P51965 193 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 TAS2R60P59551 318 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 PLP1P60201 277 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 LINC00322Q6ZN03 302 aaPredicted RBP8.29□□□□□ -1.08
TPM1-210ENST00000558264 ZNF491Q8N8L2 437 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 NUDT10Q8NFP7 164 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 NUDT11Q96G61 164 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 MRPL27Q9P0M9 148 aaKnown RBP8.29□□□□□ -1.08
TPM1-210ENST00000558264 DOPEY1Q5JWR5 2465 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 FAM106CPP0CH98 169 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 GOLT1AQ6ZVE7 132 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 SRSF8Q9BRL6 282 aaKnown RBP8.29□□□□□ -1.08
TPM1-210ENST00000558264 LINC00527Q9UJ94 153 aa8.29□□□□□ -1.08
TPM1-210ENST00000558264 CENPVL3A0A0U1RRI6 287 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 G3V318 75 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 ATP6V0E1O15342 81 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 TCRAP04437 139 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 C21orf62Q9NYP8 219 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 NAT8BQ9UHF3 227 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 FAM208BQ5VWN6 2430 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 ZNF462Q96JM2 2506 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 NPFFO15130 113 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 GATCO43716 136 aaKnown RBP8.28□□□□□ -1.08
TPM1-210ENST00000558264 CD33P20138 364 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 PDLIM4P50479 330 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 YPEL3P61236 119 aaPredicted RBP8.28□□□□□ -1.08
TPM1-210ENST00000558264 TMEM183BQ1AE95 376 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 C5orf17Q8NAS9 161 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 MS4A10Q96PG2 267 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 ATG101Q9BSB4 218 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 SHANK2-AS3Q9BTD1 123 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 CHRDL1Q9BU40 450 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 FBXL7Q9UJT9 491 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 POLQO75417 2590 aa8.28□□□□□ -1.08
TPM1-210ENST00000558264 TRAV40A0A0B4J280 105 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 NPIPB5A8MRT5 1133 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 M0R3E3 92 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 TOMM40O96008 361 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 MFAP4P55083 255 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 EBI3Q14213 229 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 C9orf152Q5JTZ5 239 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 UNQ5815/PRO19632Q6UWF5 114 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 PRNTQ86SH4 94 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 CIARTQ8N365 385 aaPredicted RBP8.27□□□□□ -1.08
TPM1-210ENST00000558264 TTC9CQ8N5M4 171 aa8.27□□□□□ -1.08
TPM1-210ENST00000558264 TP53TG3Q9ULZ0 132 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms