RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 AQP6Q13520 282 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 OR10J3Q5JRS4 329 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 SYT6Q5T7P8 510 aaPredicted RBP3.73□□□□□ -1.81
RTF1-204ENST00000558117 DNM1P34Q6PK57 102 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 ZNF676Q8N7Q3 588 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 C15orf53Q8NAA6 179 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 OR51G1Q8NGK1 321 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 OR9G1Q8NH87 305 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 DYNC2LI1Q8TCX1 351 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 RSL24D1Q9UHA3 163 aaKnown RBP3.73□□□□□ -1.81
RTF1-204ENST00000558117 SLC22A13Q9Y226 551 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 POLR1DQ9Y2S0 133 aa3.73□□□□□ -1.81
RTF1-204ENST00000558117 DEFB131BA0A096LNP1 70 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 A6NIN4 97 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 BUB1B-PAK6H3BSN5 160 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 H7C1H1 209 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 IGKV1D-33P01593 117 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 IGKV1-33P01594 117 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 IGHV3-48P01763 117 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 SLC2A1P11166 492 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 ELK1P19419 428 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 ALOX5APP20292 161 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 PFN2P35080 140 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 HRH1P35367 487 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 GUCA1AP43080 201 aaPredicted RBP3.72□□□□□ -1.81
RTF1-204ENST00000558117 SERPINB10P48595 397 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 SYNJ2BPP57105 145 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 FABP5Q01469 135 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 CD164Q04900 197 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 EBI3Q14213 229 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 GUCA2BQ16661 112 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 COX19Q49B96 90 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 ZNF684Q5T5D7 378 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 DRAM2Q6UX65 266 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 SLC16A13Q7RTY0 426 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 FAM220AQ7Z4H9 259 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 MRPL55Q7Z7F7 128 aaKnown RBP3.72□□□□□ -1.81
RTF1-204ENST00000558117 NAA40Q86UY6 237 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 Q8N6K4 173 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 OR10AC1Q8NH08 325 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 OR52N1Q8NH53 320 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 OTOSQ8NHW6 89 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 GHSRQ92847 366 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 SLAMF6Q96DU3 332 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 PDCD1LG2Q9BQ51 273 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 C20orf144Q9BQM9 153 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 LHFPL6Q9Y693 200 aa3.72□□□□□ -1.81
RTF1-204ENST00000558117 ZNF850A8MQ14 1090 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 F5H5K5 113 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 CRXO43186 299 aaPredicted RBP3.71□□□□□ -1.82
RTF1-204ENST00000558117 ZNF780AO75290 641 aaPredicted RBP3.71□□□□□ -1.82
RTF1-204ENST00000558117 CDRT1O95170 752 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 SNAPINO95295 136 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 CD37P11049 281 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 ZP3P21754 424 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 TMBIM6P55061 237 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 TAS2R31P59538 309 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 MLLT11Q13015 90 aaPredicted RBP3.71□□□□□ -1.82
RTF1-204ENST00000558117 HLA-DRB5Q30154 266 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 DEFB114Q30KQ6 69 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 ACSM3Q53FZ2 586 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 TMEM91Q6ZNR0 172 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 OR10J6PQ8NGY7 276 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 OR11H2Q8NH07 326 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 OR8S1Q8NH09 359 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 CASTOR1Q8WTX7 329 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 ASB17Q8WXJ9 295 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 ZNF714Q96N38 554 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 NXF2Q9GZY0 626 aaKnown RBP3.71□□□□□ -1.82
RTF1-204ENST00000558117 DCSTAMPQ9H295 470 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 ZNF355PQ9NSJ1 428 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 SSR3Q9UNL2 185 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 ZNF257Q9Y2Q1 563 aa3.71□□□□□ -1.82
RTF1-204ENST00000558117 TMEM269A0A1B0GVZ9 245 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 RFPL4AA6NLU0 287 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 RFPL4AL1F8VTS6 287 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 SERF1AO75920 110 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 GABARAPO95166 117 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 HLA-AP01891 365 aaKnown RBP3.7□□□□□ -1.82
RTF1-204ENST00000558117 F2RP25116 425 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 PSMA1P25786 263 aaKnown RBP3.7□□□□□ -1.82
RTF1-204ENST00000558117 HSD11B1P28845 292 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 SDC2P34741 201 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 HIST1H3AP68431 136 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 CDK5R1Q15078 307 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 TRAM1Q15629 374 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 POU2AF1Q16633 256 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 ACTBL2Q562R1 376 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 TEX30Q5JUR7 227 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 BCL2L15Q5TBC7 163 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 HIST2H3PS2Q5TEC6 136 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 ZNF660Q6AZW8 331 aaPredicted RBP3.7□□□□□ -1.82
RTF1-204ENST00000558117 RPL22L1Q6P5R6 122 aaKnown RBP3.7□□□□□ -1.82
RTF1-204ENST00000558117 HIST2H3AQ71DI3 136 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 CHST4Q8NCG5 386 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 OR51A4Q8NGJ6 313 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 OR5AK2Q8NH90 309 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 OR2AE1Q8NHA4 323 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 RAB2BQ8WUD1 216 aa3.7□□□□□ -1.82
RTF1-204ENST00000558117 MRPL48Q96GC5 212 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms