RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TAS2R45P59539 299 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 CLLU1Q5K131 121 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 PATE2Q6UY27 113 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 LINC00305Q7Z4B0 112 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 OR11H1Q8NG94 326 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 TMEM190Q8WZ59 177 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 RAB24Q969Q5 203 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 ZNF414Q96IQ9 312 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 METTL26Q96S19 204 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 C20orf24Q9BUV8 137 aa12.95□□□□□ -0.34
SNX1-203ENST00000558040 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
SNX1-203ENST00000558040 C2CD3Q4AC94 2353 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 ZNF320A2RRD8 509 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 MAP1LC3B2A6NCE7 125 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 HBE1P02100 147 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 NMBP08949 121 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
SNX1-203ENST00000558040 DEFB136Q30KP8 78 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 NARS2Q96I59 477 aaKnown RBP12.94□□□□□ -0.34
SNX1-203ENST00000558040 UHRF2Q96PU4 802 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 SLC25A39Q9BZJ4 359 aaPredicted RBP12.94□□□□□ -0.34
SNX1-203ENST00000558040 MAP1LC3BQ9GZQ8 125 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 TECRQ9NZ01 308 aaKnown RBP12.94□□□□□ -0.34
SNX1-203ENST00000558040 UFC1Q9Y3C8 167 aa12.94□□□□□ -0.34
SNX1-203ENST00000558040 H3BRN7 92 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 C8orf88P0DMB2 117 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 NPPCP23582 126 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 KRTAP10-3P60369 221 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 ZNF726P1Q15940 193 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 KHDC3LQ587J8 217 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 MIR17HGQ75NE6 70 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 REC114Q7Z4M0 266 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 C1QL4Q86Z23 238 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 SFT2D1Q8WV19 159 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 MBD3L1Q8WWY6 194 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 TMEM158Q8WZ71 300 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 SHANK2-AS3Q9BTD1 123 aa12.93□□□□□ -0.34
SNX1-203ENST00000558040 IGHV3OR16-8A0A075B7F1 116 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 TRAV1-1A0A0B4J248 108 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 K7EMT4 169 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 CCL24O00175 119 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 LGALS9O00182 355 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 NSUN5P1Q3KNT7 163 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 SPATA31B1PQ5VZV4 182 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 HIST2H2BDQ6DRA6 164 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 LCN15Q6UWW0 184 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 UNQ9165/PRO28630Q6UXU0 137 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 STXBP6Q8NFX7 210 aa12.92□□□□□ -0.34
SNX1-203ENST00000558040 PCNPQ8WW12 178 aaKnown RBP12.92□□□□□ -0.34
SNX1-203ENST00000558040 DAZ1Q9NQZ3 744 aaKnown RBP12.92□□□□□ -0.34
SNX1-203ENST00000558040 TEP1Q99973 2627 aaKnown RBP12.92□□□□□ -0.34
SNX1-203ENST00000558040 HMGB3O15347 200 aaKnown RBP12.91□□□□□ -0.34
SNX1-203ENST00000558040 CXorf1O96002 111 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 STAG3L2P0CL84 134 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 STAG3L3P0CL85 134 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 CRYBB3P26998 211 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 BMI1P35226 326 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 PQLC2Q6ZP29 291 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 SSX7Q7RTT5 188 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 RAX2Q96IS3 184 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 HRH4Q9H3N8 390 aa12.91□□□□□ -0.34
SNX1-203ENST00000558040 A0A1W2PS18 150 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 ZNF98A6NK75 572 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 ADARB2-AS1A8MUL3 147 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 A8MWP6 167 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 ZNF207O43670 478 aaKnown RBP12.9□□□□□ -0.34
SNX1-203ENST00000558040 SLURP1P55000 103 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 SYNJ2BPP57105 145 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 FHL3Q13643 280 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 KLF5Q13887 457 aaPredicted RBP12.9□□□□□ -0.34
SNX1-203ENST00000558040 MORN5Q5VZ52 161 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 GRAMD2BQ96HH9 432 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 CITED1Q99966 193 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 SCRT1Q9BWW7 348 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 SLC25A2Q9BXI2 301 aa12.9□□□□□ -0.34
SNX1-203ENST00000558040 OR7C2O60412 319 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 ARL14EPLP0DKL9 152 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 MYCNOSP40205 109 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 FGF8P55075 233 aaPredicted RBP12.89□□□□□ -0.35
SNX1-203ENST00000558040 C1orf194Q5T5A4 169 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 IQCF2Q8IXL9 164 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 LYPD6BQ8NI32 183 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 GPR82Q96P67 336 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 DUX3Q96PT4 197 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 TMEM231Q9H6L2 316 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 PEMTQ9UBM1 199 aa12.89□□□□□ -0.35
SNX1-203ENST00000558040 TRAV5A0A0B4J249 113 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 A0A1B0GV50 99 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 EIF3GO75821 320 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNX1-203ENST00000558040 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
SNX1-203ENST00000558040 LEMD1Q68G75 181 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 IL34Q6ZMJ4 242 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 BPIFA4PQ86YQ2 179 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 FAM167A-AS1Q96KT0 104 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 PAXXQ9BUH6 204 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 OR51M1Q9H341 326 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 TMEM14CQ9P0S9 112 aa12.88□□□□□ -0.35
SNX1-203ENST00000558040 U3KQE9 123 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms