RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 DEFB4AO15263 64 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 SCGB1D2O95969 90 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 LINC00299Q6ZSB3 139 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 CSNK1G2-AS1Q8NCQ2 148 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 BPIFCQ8NFQ6 507 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 C11orf45Q8TAV5 145 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 PHLDA1Q8WV24 401 aaPredicted RBP12.15□□□□□ -0.46
NEDD4-212ENST00000557845 CCDC32Q9BV29 185 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 CLEC5AQ9NY25 188 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 SLC45A2Q9UMX9 530 aa12.15□□□□□ -0.46
NEDD4-212ENST00000557845 SOCS3O14543 225 aa12.14□□□□□ -0.47
NEDD4-212ENST00000557845 ORM2P19652 201 aa12.14□□□□□ -0.47
NEDD4-212ENST00000557845 ID1P41134 155 aa12.14□□□□□ -0.47
NEDD4-212ENST00000557845 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
NEDD4-212ENST00000557845 TMEM14EPQ6UXP3 125 aa12.14□□□□□ -0.47
NEDD4-212ENST00000557845 LINC00052Q96N35 136 aa12.14□□□□□ -0.47
NEDD4-212ENST00000557845 KLK5Q9Y337 293 aaPredicted RBP12.14□□□□□ -0.47
NEDD4-212ENST00000557845 SMCO3A2RU48 225 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 ZNF98A6NK75 572 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 ZNF705EA8MWA4 302 aaPredicted RBP12.13□□□□□ -0.47
NEDD4-212ENST00000557845 CCNKO75909 580 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 METTL15P1P0C7V9 234 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 PSMB3P49720 205 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 TAS2R30P59541 319 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 NANOS2P60321 138 aaKnown RBP12.13□□□□□ -0.47
NEDD4-212ENST00000557845 GSG1LQ6UXU4 331 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 CYP2G1PQ6ZSU1 146 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 Q8NAQ8 132 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 OR10P1Q8NGE3 313 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 MFFQ9GZY8 342 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 SLC25A22Q9H936 323 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 NPVFQ9HCQ7 196 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 NUDT15Q9NV35 164 aa12.13□□□□□ -0.47
NEDD4-212ENST00000557845 CCSO14618 274 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 TSC22D2O75157 780 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 MBPP02686 304 aaPredicted RBP12.12□□□□□ -0.47
NEDD4-212ENST00000557845 IL5P05113 134 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 RBMY1A1P0DJD3 496 aaKnown RBP12.12□□□□□ -0.47
NEDD4-212ENST00000557845 RBMY1CP0DJD4 496 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 HLA-DRB4P13762 266 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 MIFP14174 115 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 DEFB1P60022 68 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 RRAS2P62070 204 aaPredicted RBP12.12□□□□□ -0.47
NEDD4-212ENST00000557845 DLK1P80370 383 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 RBMY1FQ15415 496 aaKnown RBP12.12□□□□□ -0.47
NEDD4-212ENST00000557845 GDF5OSQ5U4N7 250 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 OR1B1Q8NGR6 318 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 ZNF431Q8TF32 576 aaPredicted RBP12.12□□□□□ -0.47
NEDD4-212ENST00000557845 TMEM147Q9BVK8 224 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 C1QTNF4Q9BXJ3 329 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 SLC25A32Q9H2D1 315 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 RCL1Q9Y2P8 373 aaKnown RBP12.12□□□□□ -0.47
NEDD4-212ENST00000557845 HLA-DRB4X5D2U9 266 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 X6R8D5 127 aa12.12□□□□□ -0.47
NEDD4-212ENST00000557845 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 C7orf66A4D0T2 115 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 FNDC10F2Z333 226 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 ISLRO14498 428 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 H2AFB2P0C5Z0 115 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 S100A7P31151 101 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 GALR1P47211 349 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 ZNF846Q147U1 533 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 S100ZQ8WXG8 99 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 SEC22CQ9BRL7 303 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 RSG1Q9BU20 258 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 SAV1Q9H4B6 383 aaPredicted RBP12.11□□□□□ -0.47
NEDD4-212ENST00000557845 XCL2Q9UBD3 114 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 TBC1D24Q9ULP9 559 aa12.11□□□□□ -0.47
NEDD4-212ENST00000557845 FAM240BA0A1B0GVZ2 78 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 A6NHS1 94 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 FAM25EA8MYX2 175 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 MEOX2P50222 304 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 SELENOTP62341 195 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 SAMD13Q5VXD3 122 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 FOXI2Q6ZQN5 318 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 C12orf45Q8N5I9 185 aaPredicted RBP12.1□□□□□ -0.47
NEDD4-212ENST00000557845 C17orf77Q96MU5 243 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 GPR82Q96P67 336 aa12.1□□□□□ -0.47
NEDD4-212ENST00000557845 C5orf51A6NDU8 294 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 HYPMO75409 117 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 LY6G6CO95867 125 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 IGKV3-20P01619 116 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 PLP1P60201 277 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 ARL16Q0P5N6 197 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 MZT2BQ6NZ67 158 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 C16orf92Q96LL3 132 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 CLUHP3Q96NS8 147 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 SLC25A39Q9BZJ4 359 aaPredicted RBP12.09□□□□□ -0.47
NEDD4-212ENST00000557845 HRH4Q9H3N8 390 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 DOK5Q9P104 306 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 MGAT4CQ9UBM8 478 aa12.09□□□□□ -0.47
NEDD4-212ENST00000557845 ALMS1Q8TCU4 4167 aa12.08□□□□□ -0.47
NEDD4-212ENST00000557845 H3BRN7 92 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 L7N2F9 121 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 LINC00869P0C866 280 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 RAP2BP61225 183 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 VAMP2P63027 116 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 SPATA31B1PQ5VZV4 182 aa12.08□□□□□ -0.48
NEDD4-212ENST00000557845 TEPPQ6URK8 271 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms