RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DEFB125Q8N687 156 aa9.46□□□□□ -0.9
VIPAS39-211ENST00000557658 TMEM116Q8NCL8 245 aa9.46□□□□□ -0.9
VIPAS39-211ENST00000557658 OTORQ9NRC9 128 aa9.46□□□□□ -0.9
VIPAS39-211ENST00000557658 HLA-DRB1P01911 266 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 CEACAM8P31997 349 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 PLP1P60201 277 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 GUCD1Q96NT3 240 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 HIGD1AQ9Y241 93 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 FAM215AQ9Y5M1 114 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 TNRC18O15417 2968 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 ENSAO43768 121 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 HTR1DP28221 377 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 RPL27AP46776 148 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 C1orf185Q5T7R7 199 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 RPRMLQ8N4K4 120 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 NUP37Q8NFH4 326 aa9.45□□□□□ -0.9
VIPAS39-211ENST00000557658 MUC21A0A0G2JKD1 596 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 MUC21A0A140T8X8 626 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 NDUFB3O43676 98 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 ZNF138P52744 262 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 MRGPRG-AS1Q2M3A8 158 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 DEFB109BQ30KR1 87 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 MUC21Q5SSG8 566 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 ERASQ7Z444 233 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 CIARTQ8N365 385 aaPredicted RBP9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 ZADH2Q8N4Q0 377 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 TEX45Q8NA69 505 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 TMUB1Q9BVT8 246 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 PPIAL4EA0A075B759 164 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 IGHV3-21A0A0B4J1V1 117 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 C17orf100A8MU93 164 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 PPIAL4DF5H284 164 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 H0Y8G0 127 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 FCN3O75636 299 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 TOX4O94842 621 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 APOHP02749 345 aaPredicted RBP9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 PPIAL4FP0DN26 164 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 FAM27E3Q08E93 113 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 PRNTQ86SH4 94 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 RITA1Q96K30 269 aa9.44□□□□□ -0.9
VIPAS39-211ENST00000557658 TRAV8-1A0A0A6YYK1 113 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 COTL1Q14019 142 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 RNF151Q2KHN1 245 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 C22orf34Q6ZV56 151 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 A0A1B0GUT8 65 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 OR2T8A6NH00 312 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 CBY3A6NI87 242 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 CD5LO43866 347 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 CSN3P07498 182 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 RIGQ13278 110 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 LINC01545Q5VT33 79 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 C16orf54Q6UWD8 224 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 GOLT1AQ6ZVE7 132 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 TMEM14CQ9P0S9 112 aa9.43□□□□□ -0.9
VIPAS39-211ENST00000557658 COL6A3P12111 3177 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 TRBV6-1A0A0K0K1D8 114 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 M0R296 226 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 LYZP61626 148 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 PAX2Q02962 417 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 TMEM108Q6UXF1 575 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 ARL6IP6Q8N6S5 226 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 NEU4Q8WWR8 484 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 PMCHL2Q9BQD1 86 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 MCRIP2Q9BUT9 160 aaKnown RBP9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 AP5S1Q9NUS5 200 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 TIMM8BQ9Y5J9 83 aaPredicted RBP9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 IGHV3-72A0A0B4J1Y9 119 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 TMEM178BH3BS89 294 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 IGLV2-11P01706 119 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 APELAP0DMC3 54 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 TMEM190Q8WZ59 177 aa9.42□□□□□ -0.9
VIPAS39-211ENST00000557658 A0A1B0GW15 77 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 HOXB4P17483 251 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 GPR183P32249 361 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 ARF6P62330 175 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 AMMECR1LQ6DCA0 310 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 LYPD2Q6UXB3 125 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 ASCL5Q7RTU5 278 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 SRSF12Q8WXF0 261 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 SLC25A39Q9BZJ4 359 aaPredicted RBP9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 A0A087X0K7 114 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 PPBPP02775 128 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 COX8AP10176 69 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 PSG1P11464 419 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 CSN1S1P47710 185 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 DLX6P56179 175 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 ADIPOQQ15848 244 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 FA2HQ7L5A8 372 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 CST9LQ9H4G1 147 aa9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 F11RQ9Y624 299 aaKnown RBP9.41□□□□□ -0.9
VIPAS39-211ENST00000557658 CEACAM4O75871 244 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 ARMS2P0C7Q2 107 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 LOXP28300 417 aaPredicted RBP9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 LDLRAD2Q5SZI1 272 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 GATD1Q8NB37 220 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 CCL17Q92583 94 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 ZNF747Q9BV97 191 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 COLQQ9Y215 455 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms