RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 MFSD2BA6NFX1 497 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 OR2J3O76001 311 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 NPY1RP25929 384 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 HTR2BP41595 481 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 RHOGP84095 191 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 EXOSC2Q13868 293 aaKnown RBP9.47□□□□□ -0.89
TMEM260-215ENST00000557626 SPANXN5Q5MJ07 72 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 PRSS54Q6PEW0 395 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 ASB13Q8WXK3 278 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 ENY2Q9NPA8 101 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 S4R3C0 116 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 U3KQ87 197 aa9.47□□□□□ -0.89
TMEM260-215ENST00000557626 IGHV3-21A0A0B4J1V1 117 aa9.46□□□□□ -0.9
TMEM260-215ENST00000557626 IGHV4-28A0A0C4DH34 117 aa9.46□□□□□ -0.9
TMEM260-215ENST00000557626 TSC22D2O75157 780 aa9.46□□□□□ -0.9
TMEM260-215ENST00000557626 IGHV3-48P01763 117 aa9.46□□□□□ -0.9
TMEM260-215ENST00000557626 SNCAP37840 140 aa9.46□□□□□ -0.9
TMEM260-215ENST00000557626 SLC25A24Q6NUK1 477 aa9.46□□□□□ -0.9
TMEM260-215ENST00000557626 TMEM252Q8N6L7 170 aa9.46□□□□□ -0.9
TMEM260-215ENST00000557626 CIB3Q96Q77 187 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-215ENST00000557626 SPAG8Q99932 426 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-215ENST00000557626 LYRM2Q9NU23 88 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-215ENST00000557626 TMEM213A2RRL7 107 aa9.45□□□□□ -0.9
TMEM260-215ENST00000557626 MT-CO2P00403 227 aa9.45□□□□□ -0.9
TMEM260-215ENST00000557626 METTL15P1P0C7V9 234 aa9.45□□□□□ -0.9
TMEM260-215ENST00000557626 PRB4P10163 310 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-215ENST00000557626 SLC25A4P12235 298 aa9.45□□□□□ -0.9
TMEM260-215ENST00000557626 TCTE3Q8IZS6 198 aa9.45□□□□□ -0.9
TMEM260-215ENST00000557626 NECAP1Q8NC96 275 aa9.45□□□□□ -0.9
TMEM260-215ENST00000557626 SCARB1Q8WTV0 552 aa9.45□□□□□ -0.9
TMEM260-215ENST00000557626 MISP3Q96FF7 219 aa9.45□□□□□ -0.9
TMEM260-215ENST00000557626 STRAPQ9Y3F4 350 aaKnown RBP9.45□□□□□ -0.9
TMEM260-215ENST00000557626 NBDYA0A0U1RRE5 68 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 RNF222A6NCQ9 220 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 E5RGE8 158 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 PPP5D1E7EU14 171 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 CA1P00915 261 aaPredicted RBP9.44□□□□□ -0.9
TMEM260-215ENST00000557626 DEFA4P12838 97 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 HIST1H1BP16401 226 aaKnown RBP9.44□□□□□ -0.9
TMEM260-215ENST00000557626 P2RY1P47900 373 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 ATP5IP56385 69 aaPredicted RBP9.44□□□□□ -0.9
TMEM260-215ENST00000557626 NHLH2Q02577 135 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 C15orf32Q32M92 178 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 ZNF502Q8TBZ5 544 aa9.44□□□□□ -0.9
TMEM260-215ENST00000557626 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.43□□□□□ -0.9
TMEM260-215ENST00000557626 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 L7N2F9 121 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 CST7O76096 145 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 OR2C1O95371 312 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 IGHV3-23P01764 117 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 CAV2P51636 162 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 VAMP2P63027 116 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 C12orf74Q32Q52 190 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 AKAP14Q86UN6 197 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 FAM223AQ8IWN6 122 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 RNASEH2CQ8TDP1 164 aaKnown RBP9.43□□□□□ -0.9
TMEM260-215ENST00000557626 TNFSF18Q9UNG2 199 aa9.43□□□□□ -0.9
TMEM260-215ENST00000557626 IGKV1OR2-108A0A075B7D4 117 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 ELOA3CA0A087WX78 387 aaPredicted RBP9.42□□□□□ -0.9
TMEM260-215ENST00000557626 ZNF320A2RRD8 509 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 A8MWP6 167 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 GGCTO75223 188 aaKnown RBP9.42□□□□□ -0.9
TMEM260-215ENST00000557626 RLN2P04090 185 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 SUB1P53999 127 aaKnown RBP eCLIP9.42□□□□□ -0.9
TMEM260-215ENST00000557626 ATP5G2Q06055 141 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 GAMTQ14353 236 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 OR8G2PQ6IF36 304 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 APRG1Q8IVJ8 170 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 THAP6Q8TBB0 222 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 VN1R17PQ8TDU5 208 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 PINX1Q96BK5 328 aaKnown RBP9.42□□□□□ -0.9
TMEM260-215ENST00000557626 WFDC1Q9HC57 220 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 CELA1Q9UNI1 258 aa9.42□□□□□ -0.9
TMEM260-215ENST00000557626 IGKV1D-37A0A075B6S9 117 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 FXYD6-FXYD2A0A087WZ82 144 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 MIFP14174 115 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 CXCL2P19875 107 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 PVALBP20472 110 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-215ENST00000557626 RPL12P30050 165 aaKnown RBP9.41□□□□□ -0.9
TMEM260-215ENST00000557626 SULT1A1P50225 295 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-215ENST00000557626 FGL1Q08830 312 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 ACOT7LQ6ZUV0 252 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 GPHB5Q86YW7 130 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 AQP10Q96PS8 301 aa9.41□□□□□ -0.9
TMEM260-215ENST00000557626 PAIP2BQ9ULR5 123 aaKnown RBP9.41□□□□□ -0.9
TMEM260-215ENST00000557626 PKHD1L1Q86WI1 4243 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 FAT3Q8TDW7 4589 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 CORTO00230 105 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 IGKV1-17P01599 117 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 C1QBP02746 253 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 CTSGP08311 255 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 PET100P0DJ07 73 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 GPX4P36969 197 aaPredicted RBP9.4□□□□□ -0.9
TMEM260-215ENST00000557626 OPRK1P41145 380 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 RND2P52198 227 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 RAB11AP62491 216 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 DLK1P80370 383 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 VWC2Q2TAL6 325 aa9.4□□□□□ -0.9
TMEM260-215ENST00000557626 CLEC19AQ6UXS0 136 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms