RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 SIAH2O43255 324 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 HYPMO75409 117 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 GP9P14770 177 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 APOBEC3AP31941 199 aaPredicted RBP14.11□□□□□ -0.15
XRCC3-218ENST00000557439 FBLN7Q53RD9 439 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 PPP1R27Q86WC6 154 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 EXOC3-AS1Q8N2X6 119 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 PSG1P11464 419 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 TEX45Q8NA69 505 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 C20orf144Q9BQM9 153 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 Q9H3A6 140 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 PLGLAQ15195 96 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 MIEN1Q9BRT3 115 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 WNK2Q9Y3S1 2297 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 PPIAL4CA0A0B4J2A2 164 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 SH2D7A6NKC9 451 aaPredicted RBP14.1□□□□□ -0.15
XRCC3-218ENST00000557439 RBP4P02753 201 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 CD3EP07766 207 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 PPIAL4GP0DN37 164 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 FAM231DQ6ZW35 169 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 TMEM116Q8NCL8 245 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 SRSF12Q8WXF0 261 aaKnown RBP14.1□□□□□ -0.15
XRCC3-218ENST00000557439 TRGV9Q99603 122 aa14.1□□□□□ -0.15
XRCC3-218ENST00000557439 FOXA3P55318 350 aaPredicted RBP14.09□□□□□ -0.15
XRCC3-218ENST00000557439 CDSNQ15517 529 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 PMCHL1Q16048 86 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 RPEQ96AT9 228 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 C17orf77Q96MU5 243 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 CLEC7AQ9BXN2 247 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 ONECUT1Q9UBC0 465 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 KLF17Q5JT82 389 aaPredicted RBP14.09□□□□□ -0.15
XRCC3-218ENST00000557439 ETFRF1Q6IPR1 90 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 GTSF1Q8WW33 167 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 PGLYRP4Q96LB8 373 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 HILPDAQ9Y5L2 63 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 F11RQ9Y624 299 aaKnown RBP14.09□□□□□ -0.15
XRCC3-218ENST00000557439 COL6A6A6NMZ7 2263 aa14.09□□□□□ -0.15
XRCC3-218ENST00000557439 RNASEKQ6P5S7 137 aaKnown RBP14.08□□□□□ -0.16
XRCC3-218ENST00000557439 CIARTQ8N365 385 aaPredicted RBP14.08□□□□□ -0.16
XRCC3-218ENST00000557439 C22orf15Q8WYQ4 148 aa14.08□□□□□ -0.16
XRCC3-218ENST00000557439 NGBQ9NPG2 151 aa14.08□□□□□ -0.16
XRCC3-218ENST00000557439 SPATA45Q537H7 98 aa14.08□□□□□ -0.16
XRCC3-218ENST00000557439 MUC15Q8N387 334 aa14.08□□□□□ -0.16
XRCC3-218ENST00000557439 GPR82Q96P67 336 aa14.08□□□□□ -0.16
XRCC3-218ENST00000557439 TCRAP04437 139 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 IGLC1P0CG04 106 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 HIST1H1EP10412 219 aaKnown RBP14.07□□□□□ -0.16
XRCC3-218ENST00000557439 PRRX1P54821 245 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 MLST8Q9BVC4 326 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 B9A039 149 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 TIMM23O14925 209 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 TFPI2P48307 235 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 CASP6P55212 293 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 KLRD1Q13241 179 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 COX19Q49B96 90 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 BCL6BQ8N143 479 aaPredicted RBP14.07□□□□□ -0.16
XRCC3-218ENST00000557439 C8orf46Q8TAG6 207 aa14.07□□□□□ -0.16
XRCC3-218ENST00000557439 ALKBH7Q9BT30 221 aaPredicted RBP14.07□□□□□ -0.16
XRCC3-218ENST00000557439 ARF6P62330 175 aa14.06□□□□□ -0.16
XRCC3-218ENST00000557439 HIGD1AQ9Y241 93 aa14.06□□□□□ -0.16
XRCC3-218ENST00000557439 CNIH1O95406 144 aa14.06□□□□□ -0.16
XRCC3-218ENST00000557439 ZNF25P17030 456 aaPredicted RBP14.06□□□□□ -0.16
XRCC3-218ENST00000557439 PVRIGQ6DKI7 326 aa14.06□□□□□ -0.16
XRCC3-218ENST00000557439 GOLT1AQ6ZVE7 132 aa14.06□□□□□ -0.16
XRCC3-218ENST00000557439 C5orf17Q8NAS9 161 aa14.06□□□□□ -0.16
XRCC3-218ENST00000557439 WIPF2Q8TF74 440 aaPredicted RBP14.06□□□□□ -0.16
XRCC3-218ENST00000557439 SCNM1Q9BWG6 230 aa14.06□□□□□ -0.16
XRCC3-218ENST00000557439 SLC25A39Q9BZJ4 359 aaPredicted RBP14.06□□□□□ -0.16
XRCC3-218ENST00000557439 KLF12Q9Y4X4 402 aa14.06□□□□□ -0.16
XRCC3-218ENST00000557439 HSBP1O75506 76 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 MMDQ15546 238 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 ZNF672Q499Z4 452 aaPredicted RBP14.05□□□□□ -0.16
XRCC3-218ENST00000557439 PRNTQ86SH4 94 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 STXBP6Q8NFX7 210 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 URB1-AS1Q96HZ7 61 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 RPP21Q9H633 154 aaKnown RBP14.05□□□□□ -0.16
XRCC3-218ENST00000557439 CLEC5AQ9NY25 188 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 CACNA1BQ00975 2339 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 I3L2K1 104 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 CTRLP40313 264 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 CYB5R2Q6BCY4 276 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 EBLN2Q6P2I7 272 aa14.05□□□□□ -0.16
XRCC3-218ENST00000557439 ZFHX3Q15911 3703 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 IGKV1-17P01599 117 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 P01737 135 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 SPATA12Q7Z6I5 190 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 BORCS7Q96B45 105 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 A0A1B0GXF2 115 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 M0R2Z0 102 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 TOMM40O96008 361 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 LTAP01374 205 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 Q56UQ5 140 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 SSX8Q7RTT4 187 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 RASL11BQ9BPW5 248 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 TP73-AS1Q9UF72 201 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 AKAP6Q13023 2319 aa14.04□□□□□ -0.16
XRCC3-218ENST00000557439 SPTBN1Q01082 2364 aaKnown RBP14.04□□□□□ -0.16
XRCC3-218ENST00000557439 BTF3P20290 206 aaKnown RBP14.03□□□□□ -0.16
XRCC3-218ENST00000557439 OR4B1Q8NGF8 309 aa14.03□□□□□ -0.16
XRCC3-218ENST00000557439 C19orf71A6NCJ1 209 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms