RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 C19orf84I3L1E1 186 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 GOSR2O14653 212 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 TAAR5O14804 337 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 ENSAO43768 121 aaKnown RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 DEDDO75618 318 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 HPRT1P00492 218 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 IGHV2-5P01817 119 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 GYPAP02724 150 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 GAPDHP04406 335 aaKnown RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 SERPINE2P07093 398 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 OR8U9P0C7N5 309 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 IGHV1-8P0DP01 117 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 IL3RAP26951 378 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 PSMB6P28072 239 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 S100A11P31949 105 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 PPP1CCP36873 323 aaKnown RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 CEACAM6P40199 344 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 VDAC2P45880 294 aaPredicted RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 RAB13P51153 203 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 AP2S1P53680 142 aaPredicted RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 EDDM3BP56851 147 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 FXYD4P59646 89 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 BAXQ07812 192 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 BAMBIQ13145 260 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 EDDM3AQ14507 147 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 NDUFA5Q16718 116 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 IAH1Q2TAA2 248 aaPredicted RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 CT45A1Q5HYN5 189 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 LAMTOR1Q6IAA8 161 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 PRSS54Q6PEW0 395 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 ZNF833PQ6ZTB9 187 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 SLC51BQ86UW2 128 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 PDPNQ86YL7 162 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 SELENOHQ8IZQ5 122 aaKnown RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 LRRC75A-AS1Q8N1F1 130 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 STPG2Q8N412 459 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 KCNRGQ8N5I3 272 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 SLC35G3Q8N808 338 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 OR11H6Q8NGC7 330 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 OR8U1Q8NH10 309 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 OR52E5Q8NH55 327 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 OR4S2Q8NH73 311 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 OR4A5Q8NH83 315 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 OR9G1Q8NH87 305 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 CT45A3Q8NHU0 189 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 LHFPL5Q8TAF8 219 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 CASTOR1Q8WTX7 329 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 CCL17Q92583 94 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 RPUSD4Q96CM3 377 aaKnown RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 RNF2Q99496 336 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 CCL13Q99616 98 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 RNF5Q99942 180 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 ZNF251Q9BRH9 671 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 PARD6GQ9BYG4 376 aaPredicted RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 OR2D2Q9H210 308 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 TMEM133Q9H2Q1 129 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 C11orf1Q9H5F2 150 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 METTL8Q9H825 291 aaKnown RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 CCL28Q9NRJ3 127 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 C19orf12Q9NSK7 152 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 SDHAF2Q9NX18 166 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 DCAF16Q9NXF7 216 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 ZNF257Q9Y2Q1 563 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 PRELID3BQ9Y3B1 194 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 AMMECR1Q9Y4X0 333 aaPredicted RBP2.09□□□□□ -2.07
VRK1-207ENST00000557352 KPTNQ9Y664 436 aa2.09□□□□□ -2.07
VRK1-207ENST00000557352 VPS13CQ709C8 3753 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 MTORP42345 2549 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 IGHV3OR15-7A0A075B7D8 119 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 IGHV2-26A0A0B4J1V2 119 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 A0A1B0GW55 424 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 ODF3BA8MYP8 253 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 FNDC10F2Z333 226 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 LY6LH3BQJ8 138 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 K7EPK0 472 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 TOR1AO14656 332 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 SOX15O60248 233 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 ADAP1O75689 374 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 HRASP01112 189 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 IFNA7P01567 189 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 IGKV1-39P01597 117 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 IGKV1-5P01602 117 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 OPN1MWP04001 364 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 RLN2P04090 185 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 IGKV1D-39P04432 117 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 CHTF8P0CG12 524 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 DUX4L2P0CJ85 424 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 DUX4L3P0CJ86 424 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 DUX4L5P0CJ88 424 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 DUX4L6P0CJ89 424 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 DUX4L7P0CJ90 424 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 SAA2P0DJI9 122 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 OPN1MW2P0DN77 364 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 OPN1MW3P0DN78 364 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 COX6B1P14854 86 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 NQO2P16083 231 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 SLC25A16P16260 332 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 CRISP2P16562 243 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 PVALBP20472 110 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 PRTN3P24158 256 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms