RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 OR52E5Q8NH55 327 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 SUN5Q8TC36 379 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 TMEM208Q9BTX3 173 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 PBDC1Q9BVG4 233 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 MAGT1Q9H0U3 335 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 PRR13Q9NZ81 148 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 COPZ2Q9P299 210 aa6.33□□□□□ -1.4
HNRNPC-227ENST00000556897 CEBPZOSA8MTT3 80 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 ZNF705GA8MUZ8 300 aaPredicted RBP6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 F5H768 121 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 NUP62P37198 522 aaPredicted RBP6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 PAX9P55771 341 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 CCL18P55774 89 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 KRTAP10-2P60368 255 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 LSM3P62310 102 aaKnown RBP6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 RNASE12Q5GAN4 147 aaKnown RBP6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 RNASE10Q5GAN6 216 aaKnown RBP6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 SPATA31B1PQ5VZV4 182 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 ETFRF1Q6IPR1 90 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 SLC51BQ86UW2 128 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 TRIM63Q969Q1 353 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 GPR146Q96CH1 333 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 COMMD3Q9UBI1 195 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 CACNG5Q9UF02 275 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 LINC00588Q9Y4M8 146 aa6.32□□□□□ -1.4
HNRNPC-227ENST00000556897 A0A0J9YX75 114 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 FAM25EA8MYX2 175 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 FAM229AH3BQW9 127 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 ISLRO14498 428 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 CDS2O95674 445 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 APOA1P02647 267 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 OR5AC1P0C628 307 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 ZNF846Q147U1 533 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 FCN2Q15485 313 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 OR8G2PQ6IF36 304 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 CDPF1Q6NVV7 123 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 FAM219AQ8IW50 185 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 CCDC71LQ8N9Z2 235 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 OR13C8Q8NGS7 320 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 LHFPL5Q8TAF8 219 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 C20orf173Q96LM9 149 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 IGF2BP2-AS1Q96M15 143 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 TMEM222Q9H0R3 208 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 DOK5Q9P104 306 aa6.31□□□□□ -1.4
HNRNPC-227ENST00000556897 ZFP92A6NM28 416 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 LYRM9A8MSI8 78 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 EPM2AB3EWF7 344 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 NOL3O60936 208 aaKnown RBP6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 CD3DP04234 171 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 ELK1P19419 428 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 LYZP61626 148 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 SUPT4H1P63272 117 aaKnown RBP6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 ZNF90Q03938 601 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 KLF9Q13886 244 aaPredicted RBP6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 MEF2DQ14814 521 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 C1orf194Q5T5A4 169 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 AMTNQ6UX39 209 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 SSX7Q7RTT5 188 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 OR8I2Q8N0Y5 310 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 ARRDC1Q8N5I2 433 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 OR4D10Q8NGI6 311 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 OR4C16Q8NGL9 310 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 TERB2Q8NHR7 220 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 ZFAND1Q8TCF1 268 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 MARCH1Q8TCQ1 289 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 GLYATL2Q8WU03 294 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 S100ZQ8WXG8 99 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 RBPMSQ93062 196 aaKnown RBP6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 ABHD1Q96SE0 405 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 BCL7BQ9BQE9 202 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 Q9H8V8 135 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 RPRMQ9NS64 109 aa6.3□□□□□ -1.4
HNRNPC-227ENST00000556897 IGKV1D-37A0A075B6S9 117 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 PLAC8L1A1L4L8 177 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 M0R2Z0 102 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 CRXO43186 299 aaPredicted RBP6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 HPGDSO60760 199 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 B3GALNT1O75752 331 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 INSP01308 110 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 ATP5G1P05496 136 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 AZU1P20160 251 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 ATP5G3P48201 142 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 TMBIM6P55061 237 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 DLK1P80370 383 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 OR2F1Q13607 317 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 CLINT1Q14677 625 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 SPINK13Q1W4C9 94 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 SCGB2B2Q4G0G5 96 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 NMSQ5H8A3 153 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 TMEM268Q5VZI3 342 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 NOXA1Q86UR1 476 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 SELENOHQ8IZQ5 122 aaKnown RBP6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 C16orf92Q96LL3 132 aa6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 FLG2Q5D862 2391 aaPredicted RBP6.29□□□□□ -1.4
HNRNPC-227ENST00000556897 TEX13DA0A0J9YY54 714 aaPredicted RBP6.28□□□□□ -1.4
HNRNPC-227ENST00000556897 A8MTW9 85 aa6.28□□□□□ -1.4
HNRNPC-227ENST00000556897 SNRPGP15A8MWD9 76 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms