RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 OR4F17Q8NGA8 305 aa7.1□□□□□ -1.27
ACTN1-218ENST00000556343 GRAMD2BQ96HH9 432 aa7.1□□□□□ -1.27
ACTN1-218ENST00000556343 OR4F4Q96R69 305 aa7.1□□□□□ -1.27
ACTN1-218ENST00000556343 RPRMQ9NS64 109 aa7.1□□□□□ -1.27
ACTN1-218ENST00000556343 MRPL27Q9P0M9 148 aaKnown RBP7.1□□□□□ -1.27
ACTN1-218ENST00000556343 DOK5Q9P104 306 aa7.1□□□□□ -1.27
ACTN1-218ENST00000556343 PEMTQ9UBM1 199 aa7.1□□□□□ -1.27
ACTN1-218ENST00000556343 C2CD3Q4AC94 2353 aa7.1□□□□□ -1.27
ACTN1-218ENST00000556343 IGHV4OR15-8A0A075B7B6 117 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 A0A087WW49 117 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 IGHV3-35A0A0C4DH35 117 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 SEC14L6B5MCN3 397 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 CCL24O00175 119 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 LGALS9O00182 355 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 RGS13O14921 159 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 TRBV12-3P01733 135 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 C8orf88P0DMB2 117 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 HOXD3P31249 432 aaPredicted RBP7.09□□□□□ -1.27
ACTN1-218ENST00000556343 PPT1P50897 306 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 NSUN5P1Q3KNT7 163 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 KHDC3LQ587J8 217 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 REC114Q7Z4M0 266 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 PRIMA1Q86XR5 153 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 SFT2D1Q8WV19 159 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 GPR82Q96P67 336 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 ELOVL1Q9BW60 279 aa7.09□□□□□ -1.27
ACTN1-218ENST00000556343 SLC25A39Q9BZJ4 359 aaPredicted RBP7.09□□□□□ -1.27
ACTN1-218ENST00000556343 CUBNO60494 3623 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 CXorf1O96002 111 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 CD5P06127 495 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 IFITM2Q01629 132 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 KLF5Q13887 457 aaPredicted RBP7.08□□□□□ -1.28
ACTN1-218ENST00000556343 KRTAP24-1Q3LI83 254 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 FAM74A1Q5RGS3 127 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 C1orf194Q5T5A4 169 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 PQLC2Q6ZP29 291 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 C8orf86Q6ZUL3 223 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 BPIFA4PQ86YQ2 179 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 RPP25LQ8N5L8 163 aaKnown RBP7.08□□□□□ -1.28
ACTN1-218ENST00000556343 MBD3L1Q8WWY6 194 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 TMEM37Q8WXS4 190 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 TMEM190Q8WZ59 177 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 RAB24Q969Q5 203 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 MARC2Q969Z3 335 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 ZNF747Q9BV97 191 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 ZFAND3Q9H8U3 227 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 DAZ1Q9NQZ3 744 aaKnown RBP7.08□□□□□ -1.28
ACTN1-218ENST00000556343 TMEM167BQ9NRX6 74 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 RFNGQ9Y644 331 aa7.08□□□□□ -1.28
ACTN1-218ENST00000556343 TRAV1-1A0A0B4J248 108 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 MAP1LC3B2A6NCE7 125 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 ZNF98A6NK75 572 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 H3BRN7 92 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 OR7C2O60412 319 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 IFNA1P01562 189 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 PF4P02776 101 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 RPL7P18124 248 aaKnown RBP7.07□□□□□ -1.28
ACTN1-218ENST00000556343 CRYBB3P26998 211 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 SYNJ2BPP57105 145 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 USF2Q15853 346 aaPredicted RBP7.07□□□□□ -1.28
ACTN1-218ENST00000556343 GCSAMLQ5JQS6 135 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 CLLU1Q5K131 121 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 SHISA2Q6UWI4 295 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 LCN15Q6UWW0 184 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 PATE2Q6UY27 113 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 C18orf65Q6ZTR6 163 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 OR8I2Q8N0Y5 310 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 RCC1LQ96I51 464 aaKnown RBP7.07□□□□□ -1.28
ACTN1-218ENST00000556343 CITED1Q99966 193 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 SHANK2-AS3Q9BTD1 123 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 MAP1LC3BQ9GZQ8 125 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 VSIRQ9H7M9 311 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 SLC25A22Q9H936 323 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 PLA2G2EQ9NZK7 142 aa7.07□□□□□ -1.28
ACTN1-218ENST00000556343 SETD2Q9BYW2 2564 aaPredicted RBP7.06□□□□□ -1.28
ACTN1-218ENST00000556343 STAG3L2P0CL84 134 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 STAG3L3P0CL85 134 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 TAGLN2P37802 199 aaKnown RBP7.06□□□□□ -1.28
ACTN1-218ENST00000556343 GALR1P47211 349 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 PSMB3P49720 205 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 MEOX2P50222 304 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 SLURP1P55000 103 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 DEFB136Q30KP8 78 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 IL34Q6ZMJ4 242 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 MIR17HGQ75NE6 70 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 IQCF2Q8IXL9 164 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 RAX2Q96IS3 184 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 PAXXQ9BUH6 204 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 OR51M1Q9H341 326 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 HRH4Q9H3N8 390 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 SEPSECSQ9HD40 501 aaKnown RBP7.06□□□□□ -1.28
ACTN1-218ENST00000556343 TMEM14CQ9P0S9 112 aa7.06□□□□□ -1.28
ACTN1-218ENST00000556343 IGHV7-4-1A0A0J9YVY3 117 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 HELTA6NFD8 242 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 ZNF785A8K8V0 405 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 A8MWP6 167 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 OVOL1O14753 267 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 ZNF207O43670 478 aaKnown RBP7.05□□□□□ -1.28
ACTN1-218ENST00000556343 BUB3O43684 328 aa7.05□□□□□ -1.28
ACTN1-218ENST00000556343 HIST1H1EP10412 219 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms