RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 SHPKQ9UHJ6 478 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 C14orf166Q9Y224 244 aaKnown RBP4.98□□□□□ -1.61
PSEN1-216ENST00000556066 FRAS1Q86XX4 4008 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 PCLOQ9Y6V0 5065 aa4.98□□□□□ -1.61
PSEN1-216ENST00000556066 ALMS1Q8TCU4 4167 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 A0A0J9YWU9 116 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 RPS10-NUDT3A0A1W2PQS6 291 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 LINC00862A6NCI5 91 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 OR4C46A6NHA9 309 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 MPTX1A8MV57 137 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 SPRY2O43597 315 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 IFNA7P01567 189 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 CTSGP08311 255 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 HOXB5P09067 269 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 SLC25A4P12235 298 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 HOXA5P20719 270 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 TFPI2P48307 235 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 LINC00310P59036 64 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 SURF2Q15527 256 aaPredicted RBP4.97□□□□□ -1.61
PSEN1-216ENST00000556066 IZUMO4Q1ZYL8 232 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 SMUG1Q53HV7 270 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 SPINK9Q5DT21 86 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 ZNF546Q86UE3 836 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 FAM219AQ8IW50 185 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 STPG3Q8N7X2 389 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 OR1P1Q8NH06 330 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 PPP1R1CQ8WVI7 109 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 RNF126Q9BV68 326 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 ARL6Q9H0F7 186 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 TNFSF18Q9UNG2 199 aa4.97□□□□□ -1.61
PSEN1-216ENST00000556066 IGHV3OR16-13A0A075B7E8 117 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 IGHV3-74A0A0B4J1X5 117 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 A0A0D9SG52 128 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 TEX13DA0A0J9YY54 714 aaPredicted RBP4.96□□□□□ -1.62
PSEN1-216ENST00000556066 RNF222A6NCQ9 220 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 C5orf52A6NGY3 159 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 CRYM-AS1A6NIL9 109 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 C15orf62A8K5M9 175 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 H0YIZ8 118 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 K7EMT4 169 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 K7EQM0 130 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 GNG7O60262 68 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 CLN5O75503 358 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 MT-CO2P00403 227 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 IGKV1-39P01597 117 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 IGKV1D-39P04432 117 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 C4BPBP20851 252 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 AKR1C2P52895 323 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 HSPE1P61604 102 aaKnown RBP4.96□□□□□ -1.62
PSEN1-216ENST00000556066 ERHP84090 104 aaKnown RBP4.96□□□□□ -1.62
PSEN1-216ENST00000556066 FGL1Q08830 312 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 ODF3L2Q3SX64 289 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 SP6Q3SY56 376 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM41BQ5BJD5 291 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 CLLU1Q5K131 121 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 Q6ZWC4 215 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 APRG1Q8IVJ8 170 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 GBGT1Q8N5D6 347 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 KCNRGQ8N5I3 272 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 COQ8AQ8NI60 647 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 THAP6Q8TBB0 222 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 RNF2Q99496 336 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 RHPN1-AS1Q9BWJ2 59 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 NMES1Q9C002 83 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 TREM1Q9NP99 234 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 SMPXQ9UHP9 88 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 AGRNO00468 2067 aa4.96□□□□□ -1.62
PSEN1-216ENST00000556066 IGHV7-4-1A0A0J9YVY3 117 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 I3L2K1 104 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 CHEK1O14757 476 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 LY6G6CO95867 125 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 IFNA17P01571 189 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 SNCAP37840 140 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 PIGPP57054 158 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 CYCSP99999 105 aaKnown RBP4.95□□□□□ -1.62
PSEN1-216ENST00000556066 PRCDQ00LT1 54 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 EWSR1Q01844 656 aaKnown RBP eCLIP4.95□□□□□ -1.62
PSEN1-216ENST00000556066 IL15RAQ13261 267 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 OR2F1Q13607 317 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 TMEM187Q14656 261 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 GGNBP1Q5YKI7 109 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 ALKAL2Q6UX46 152 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 ACOT7LQ6ZUV0 252 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 COMMD7Q86VX2 200 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 SLC35G3Q8N808 338 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 OR1S1Q8NH92 325 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 RNASE11Q8TAA1 199 aaKnown RBP4.95□□□□□ -1.62
PSEN1-216ENST00000556066 OCC1Q8TAD7 63 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 RRNAD1Q96FB5 475 aaKnown RBP4.95□□□□□ -1.62
PSEN1-216ENST00000556066 GALNT14Q96FL9 552 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 C2orf50Q96LR7 162 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 TP53RKQ96S44 253 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 NAA60Q9H7X0 242 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 OR5AC2Q9NZP5 309 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 GSKIPQ9P0R6 139 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 TP53TG1Q9Y2A0 90 aa4.95□□□□□ -1.62
PSEN1-216ENST00000556066 IGHV3-66A0A0C4DH42 116 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 KIR2DL5BA0A0G2JN68 375 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 KIR2DL5BA0A0G2JPC4 375 aa4.94□□□□□ -1.62
PSEN1-216ENST00000556066 C3orf85A0A1B0GTC6 90 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms