RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 DNAH17Q9UFH2 4485 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 SOCS3O14543 225 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 NOL3O60936 208 aaKnown RBP5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 UBE2MP61081 183 aaKnown RBP5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 B2MP61769 119 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 ZNF90Q03938 601 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 ZNF79Q15937 498 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 C4orf46Q504U0 113 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 EBLN2Q6P2I7 272 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 OR8I2Q8N0Y5 310 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 TOMM5Q8N4H5 51 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 POM121L12Q8N7R1 296 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 MCFD2Q8NI22 146 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 NDUFAF3Q9BU61 184 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 CLEC5AQ9NY25 188 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 XCL2Q9UBD3 114 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 RFNGQ9Y644 331 aa5.59□□□□□ -1.51
PTCSC3-201ENST00000556013 HECTD4Q9Y4D8 3996 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 HERC2O95714 4834 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 A8MTW9 85 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 SYNGR2O43760 224 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 SFT2D2O95562 160 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 GALR1P47211 349 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 PSG9Q00887 426 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 ID3Q02535 119 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 LGALS9BQ3B8N2 356 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 S100A7AQ86SG5 101 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 OR1B1Q8NGR6 318 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 PBDC1Q9BVG4 233 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 WDR12Q9GZL7 423 aaKnown RBP5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 RPRMQ9NS64 109 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 RNF24Q9Y225 148 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 GOLT1BQ9Y3E0 138 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
PTCSC3-201ENST00000556013 IGKV1OR2-108A0A075B7D4 117 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 A0A0J9YX75 114 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 ZNF98A6NK75 572 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 PRSS46E5RG02 174 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 H3BMQ9 156 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 DUSP14O95147 198 aaKnown RBP5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 S100A5P33763 92 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 PLP1P60201 277 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 RNF212Q495C1 297 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 TMEM144Q7Z5S9 345 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 ZNF709Q8N972 641 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 BPIFCQ8NFQ6 507 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 COQ8AQ8NI60 647 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 TRIM63Q969Q1 353 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 PPP1R14BQ96C90 147 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 LINC00052Q96N35 136 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 NIPSNAP3BQ9BS92 247 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 DKK2Q9UBU2 259 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 CELA1Q9UNI1 258 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 FAT2Q9NYQ8 4349 aa5.57□□□□□ -1.52
PTCSC3-201ENST00000556013 NAP1L6A6NFF2 107 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 FNDC10F2Z333 226 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 IFNA21P01568 189 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 HBE1P02100 147 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 FAM3BP58499 235 aaPredicted RBP5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 LYZP61626 148 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 SELENOTP62341 195 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 RRN3P1Q2M238 152 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 CNPY1Q3B7I2 92 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 PYDC2Q56P42 97 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 GDF5OSQ5U4N7 250 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 TMED4Q7Z7H5 227 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 CCDC190Q86UF4 302 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 C1orf158Q8N1D5 194 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 OR4B1Q8NGF8 309 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 C16orf92Q96LL3 132 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 IGF2BP2-AS1Q96M15 143 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 PRR13Q9NZ81 148 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 DOK5Q9P104 306 aa5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 STRAPQ9Y3F4 350 aaKnown RBP5.56□□□□□ -1.52
PTCSC3-201ENST00000556013 ZNF701M0R085 212 aaPredicted RBP5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 WRBO00258 174 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 RPL7P18124 248 aaKnown RBP5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 VAMP1P23763 118 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 TSPOP30536 169 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 RAP2BP61225 183 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 PPP1R1AQ13522 171 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 OR2F1Q13607 317 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 FAM78BQ5VT40 261 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 SMIM8Q96KF7 97 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 RSG1Q9BU20 258 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 TMEM147Q9BVK8 224 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 MAGT1Q9H0U3 335 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 NPVFQ9HCQ7 196 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 V9GYH0 126 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 DNAH11Q96DT5 4516 aa5.55□□□□□ -1.52
PTCSC3-201ENST00000556013 C9orf170A2RU37 121 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 PMS2P5A8MQ11 134 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 LYRM9A8MSI8 78 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 K7EPK0 472 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 HOXB5P09067 269 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 IAPPP10997 89 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 TAS2R30P59541 319 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 SPANXN5Q5MJ07 72 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 PXDC1Q5TGL8 231 aa5.54□□□□□ -1.52
PTCSC3-201ENST00000556013 FAM222AQ5U5X8 452 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms