RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 NTF3P20783 257 aa12.92□□□□□ -0.34
TUBB3-209ENST00000555609 RBPJQ06330 500 aa12.92□□□□□ -0.34
TUBB3-209ENST00000555609 PPP1R27Q86WC6 154 aa12.92□□□□□ -0.34
TUBB3-209ENST00000555609 MSRB2Q9Y3D2 182 aa12.92□□□□□ -0.34
TUBB3-209ENST00000555609 MAP1BP46821 2468 aaKnown RBP12.92□□□□□ -0.34
TUBB3-209ENST00000555609 IGHV1-3A0A0C4DH29 117 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 FAM181BA6NEQ2 426 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 NPIPB6E9PJ23 425 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 BUB1B-PAK6H3BSN5 160 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 IGHV3-48P01763 117 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 RBPMS2Q6ZRY4 209 aaKnown RBP12.91□□□□□ -0.34
TUBB3-209ENST00000555609 FAM19A2Q8N3H0 131 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 LPAR2Q9HBW0 351 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 MRPS16Q9Y3D3 137 aaKnown RBP12.91□□□□□ -0.34
TUBB3-209ENST00000555609 ANKRD11Q6UB99 2663 aaPredicted RBP12.91□□□□□ -0.34
TUBB3-209ENST00000555609 TEX22C9J3V5 150 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 PLAUP00749 431 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 LINC00614P0C842 121 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 TMEM208Q9BTX3 173 aa12.91□□□□□ -0.34
TUBB3-209ENST00000555609 TRAV9-2A0A087WT02 112 aa12.9□□□□□ -0.34
TUBB3-209ENST00000555609 G0S2P27469 103 aa12.9□□□□□ -0.34
TUBB3-209ENST00000555609 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
TUBB3-209ENST00000555609 TXN2Q99757 166 aa12.9□□□□□ -0.34
TUBB3-209ENST00000555609 IGLC1P0CG04 106 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 HOXB4P17483 251 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-209ENST00000555609 CAMPP49913 170 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 FOXA3P55318 350 aaPredicted RBP12.89□□□□□ -0.35
TUBB3-209ENST00000555609 ANKRD39Q53RE8 183 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 S100A7AQ86SG5 101 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 NDFIP1Q9BT67 221 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 GOLT1BQ9Y3E0 138 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 PLCE1Q9P212 2302 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 VWC2LB2RUY7 222 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 OR5AL1P0C617 328 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 FAM87AP0C7U9 286 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 Q6ZN92 141 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 ABHD17AQ96GS6 310 aa12.89□□□□□ -0.35
TUBB3-209ENST00000555609 IGHV3-72A0A0B4J1Y9 119 aa12.88□□□□□ -0.35
TUBB3-209ENST00000555609 I3L2K1 104 aa12.88□□□□□ -0.35
TUBB3-209ENST00000555609 HAX1O00165 279 aa12.88□□□□□ -0.35
TUBB3-209ENST00000555609 CRXO43186 299 aaPredicted RBP12.88□□□□□ -0.35
TUBB3-209ENST00000555609 CD3EP07766 207 aa12.88□□□□□ -0.35
TUBB3-209ENST00000555609 RNASEKQ6P5S7 137 aaKnown RBP12.88□□□□□ -0.35
TUBB3-209ENST00000555609 SLC25A39Q9BZJ4 359 aaPredicted RBP12.88□□□□□ -0.35
TUBB3-209ENST00000555609 ZFP30Q9Y2G7 519 aa12.88□□□□□ -0.35
TUBB3-209ENST00000555609 SVILO95425 2214 aa12.88□□□□□ -0.35
TUBB3-209ENST00000555609 A0A1B0GW15 77 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 C2orf70A6NJV1 201 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 PSG1P11464 419 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 RUSC1-AS1Q66K80 236 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 TCF24Q7RTU0 167 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 Q86TA4 180 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 Q8NA96 180 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 SRSF12Q8WXF0 261 aaKnown RBP12.87□□□□□ -0.35
TUBB3-209ENST00000555609 RPEQ96AT9 228 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 RASL11BQ9BPW5 248 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 LAMTOR2Q9Y2Q5 125 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 DSPP15924 2871 aaKnown RBP12.87□□□□□ -0.35
TUBB3-209ENST00000555609 LY6LH3BQJ8 138 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 EBLN2Q6P2I7 272 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 OR2D3Q8NGH3 330 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 GTSF1Q8WW33 167 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 TMEM70Q9BUB7 260 aa12.87□□□□□ -0.35
TUBB3-209ENST00000555609 LOC400499M0QZD8 3231 aa12.86□□□□□ -0.35
TUBB3-209ENST00000555609 CNTFRP26992 372 aa12.86□□□□□ -0.35
TUBB3-209ENST00000555609 GPR6P46095 362 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-209ENST00000555609 LYZP61626 148 aa12.86□□□□□ -0.35
TUBB3-209ENST00000555609 LINC00322Q6ZN03 302 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-209ENST00000555609 TMEM75Q8N9X5 138 aa12.86□□□□□ -0.35
TUBB3-209ENST00000555609 GATD1Q8NB37 220 aa12.86□□□□□ -0.35
TUBB3-209ENST00000555609 SSBP4Q9BWG4 385 aaPredicted RBP12.86□□□□□ -0.35
TUBB3-209ENST00000555609 WNT10AQ9GZT5 417 aa12.86□□□□□ -0.35
TUBB3-209ENST00000555609 RPH3ALQ9UNE2 315 aa12.86□□□□□ -0.35
TUBB3-209ENST00000555609 K7EQM0 130 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 COL8A1P27658 744 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 BPIFA4PQ86YQ2 179 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 VKORC1Q9BQB6 163 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 SHANK2-AS3Q9BTD1 123 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 EPG5Q9HCE0 2579 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 USP24Q9UPU5 2620 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 PPIAL4CA0A0B4J2A2 164 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 CHEK1O14757 476 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 PPIAL4GP0DN37 164 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 TSPOP30536 169 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 BATFQ16520 125 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 OR4F17Q8NGA8 305 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 PGLYRP4Q96LB8 373 aa12.85□□□□□ -0.35
TUBB3-209ENST00000555609 TRAV30A0A087WSZ9 112 aa12.84□□□□□ -0.35
TUBB3-209ENST00000555609 LOC102724200A0A096LPH7 203 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-209ENST00000555609 Q6AWC8 147 aa12.84□□□□□ -0.35
TUBB3-209ENST00000555609 URB1-AS1Q96HZ7 61 aa12.84□□□□□ -0.35
TUBB3-209ENST00000555609 FBXL15Q9H469 300 aa12.84□□□□□ -0.35
TUBB3-209ENST00000555609 TRBV19A0A075B6N1 114 aa12.83□□□□□ -0.36
TUBB3-209ENST00000555609 H3BRN7 92 aa12.83□□□□□ -0.36
TUBB3-209ENST00000555609 IGLV2-11P01706 119 aa12.83□□□□□ -0.36
TUBB3-209ENST00000555609 RIGQ13278 110 aa12.83□□□□□ -0.36
TUBB3-209ENST00000555609 LY6G5BQ8NDX9 201 aa12.83□□□□□ -0.36
TUBB3-209ENST00000555609 RAB1BQ9H0U4 201 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms